RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 HMBOX1Q6NT76 420 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 FRRS1Q6ZNA5 592 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 CHMP1BQ7LBR1 199 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 SERPINA11Q86U17 422 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 ANKRD46Q86W74 232 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 GRAMD2AQ8IUY3 354 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 CLECL1Q8IZS7 167 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 SLC43A2Q8N370 569 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 TRIML2Q8N7C3 387 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 OR6K3Q8NGY3 331 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 OR10D3Q8NH80 312 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 OR2V1Q8NHB1 315 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 FNDC9Q8TBE3 224 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 RNF128Q8TEB7 428 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 ZFP90Q8TF47 636 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 WIPF2Q8TF74 440 aaPredicted RBP3.66□□□□□ -1.82
CPSF2-204ENST00000555244 TMEM170AQ8WVE7 144 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 IGFBPL1Q8WX77 278 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 FIG4Q92562 907 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 OSTF1Q92882 214 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 CPNE4Q96A23 557 aaPredicted RBP3.66□□□□□ -1.82
CPSF2-204ENST00000555244 EME1Q96AY2 570 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 ZNF524Q96C55 264 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 INTS12Q96CB8 462 aaKnown RBP3.66□□□□□ -1.82
CPSF2-204ENST00000555244 GMPPAQ96IJ6 420 aaPredicted RBP3.66□□□□□ -1.82
CPSF2-204ENST00000555244 KLHL15Q96M94 604 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 CCDC28BQ9BUN5 200 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 RBM24Q9BX46 236 aaKnown RBP3.66□□□□□ -1.82
CPSF2-204ENST00000555244 SLC38A1Q9H2H9 487 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 CXorf56Q9H5V9 222 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 WDR55Q9H6Y2 383 aaPredicted RBP3.66□□□□□ -1.82
CPSF2-204ENST00000555244 PLEKHF2Q9H8W4 249 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 MTHFD2LQ9H903 347 aaPredicted RBP3.66□□□□□ -1.82
CPSF2-204ENST00000555244 SPAG4Q9NPE6 437 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 EXD2Q9NVH0 621 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 THUMPD1Q9NXG2 353 aaKnown RBP3.66□□□□□ -1.82
CPSF2-204ENST00000555244 NKIRAS1Q9NYS0 192 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 AASSQ9UDR5 926 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 SLC35A3Q9Y2D2 325 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 RPH3AQ9Y2J0 694 aaPredicted RBP3.66□□□□□ -1.82
CPSF2-204ENST00000555244 SNX8Q9Y5X2 465 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 C2CD3Q4AC94 2353 aa3.66□□□□□ -1.82
CPSF2-204ENST00000555244 MED13LQ71F56 2210 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 A0A087X0M5 115 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 A0A1B0GX30 115 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 GAGE12JA6NER3 117 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 CGB1A6NKQ9 187 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 ZNF724A8MTY0 619 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 DEFB108AA8MXU0 73 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 F5H0A9 414 aaPredicted RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 C16orf97H3BN30 126 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 GTPBP1O00178 669 aaKnown RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 CFLARO15519 480 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 ZNF208O43345 1280 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 CYTIPO60759 359 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 KRT75O95678 551 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 TFPTP0C1Z6 253 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 OR12D1P0DN82 309 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 UBL4AP11441 157 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 CD1EP15812 388 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 PAX1P15863 534 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 PGCP20142 388 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 PSMB1P20618 241 aaKnown RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 EFNA1P20827 205 aaPredicted RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 CRYGSP22914 178 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 LMO1P25800 156 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 LOXP28300 417 aaPredicted RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 CCKARP32238 428 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 UGT2B10P36537 528 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 APOBEC1P41238 236 aaKnown RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 KHKP50053 298 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 ATP4BP51164 291 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 ZNF41P51814 821 aaPredicted RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 CARD18P57730 90 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 KCNJ10P78508 379 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 SRYQ05066 204 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 FAM27E3Q08E93 113 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 FOXF1Q12946 379 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 STX5Q13190 355 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 SELENBP1Q13228 472 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 QPRTQ15274 297 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 RNPS1Q15287 305 aaKnown RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 TAF11Q15544 211 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 TOMM34Q15785 309 aaPredicted RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 ZNF239Q16600 458 aaKnown RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 TSTQ16762 297 aaKnown RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 SLC9B1Q4ZJI4 515 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 PDSS1Q5T2R2 415 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 PDZK1Q5T2W1 519 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 ATAD3BQ5T9A4 648 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 SERTAD4-AS1Q5TG53 156 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 TMPPEQ6ZT21 453 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 H1FNTQ75WM6 255 aaPredicted RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 EIF3MQ7L2H7 374 aaKnown RBP3.65□□□□□ -1.83
CPSF2-204ENST00000555244 SSX8Q7RTT4 187 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 GALNT10Q86SR1 603 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 CDC20BQ86Y33 519 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 FUNDC1Q8IVP5 155 aa3.65□□□□□ -1.83
CPSF2-204ENST00000555244 GABRG1Q8N1C3 465 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms