RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SLC51BQ86UW2 128 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 JAZF1Q86VZ6 243 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 NR2C2APQ86WQ0 139 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 PM20D2Q8IYS1 436 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 C10orf53Q8N6V4 93 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 NKD1Q969G9 470 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 OTULINQ96BN8 352 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 MRPL13Q9BYD1 178 aaKnown RBP7.98□□□□□ -1.13
TDP1-210ENST00000554976 SSR3Q9UNL2 185 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 B9D1Q9UPM9 204 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 POLHQ9Y253 713 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 SPENQ96T58 3664 aaKnown RBP7.98□□□□□ -1.13
TDP1-210ENST00000554976 AKR7A3O95154 331 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 CLEC2LP0C7M8 214 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 FOSL1P15407 271 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 TGM4P49221 684 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 ACTA2P62736 377 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 ACTG2P63267 376 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 PUDPQ08623 228 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 SELENBP1Q13228 472 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 RPTNQ6XPR3 784 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 H1FNTQ75WM6 255 aaPredicted RBP7.98□□□□□ -1.13
TDP1-210ENST00000554976 SLC38A6Q8IZM9 456 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 MINDY2Q8NBR6 621 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 MCFD2Q8NI22 146 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 SLC25A36Q96CQ1 311 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 WDFY2Q96P53 400 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 SDHCQ99643 169 aaPredicted RBP7.98□□□□□ -1.13
TDP1-210ENST00000554976 DEPPQ9NTK1 212 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 FKBP7Q9Y680 259 aa7.98□□□□□ -1.13
TDP1-210ENST00000554976 CLDN25C9JDP6 229 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 MAGEB4O15481 346 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 ICMTO60725 284 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 SRSF10O75494 262 aaKnown RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 GPANK1O95872 356 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 HIST1H2ABP04908 130 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 FTH1P19P0C7X4 201 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 KLK2P20151 261 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 ACVR1BP36896 505 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 NAA10P41227 235 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 DSCR4P56555 118 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 RPS7P62081 194 aaKnown RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 IFITM2Q01629 132 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 LGALS3BPQ08380 585 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 ZNF846Q147U1 533 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 MFSD13AQ14CX5 517 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 CDK5R1Q15078 307 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 OR7A5Q15622 319 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 HIST3H3Q16695 136 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 GLYR1Q49A26 553 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 UNQ9370/PRO34162Q6UXP9 181 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 ASB18Q6ZVZ8 466 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 HIST3H2AQ7L7L0 130 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 GHDCQ8N2G8 530 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 TEX19Q8NA77 164 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 OR5M1Q8NGP8 315 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 HIST1H2ACQ93077 130 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 TMEM203Q969S6 136 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 MAP6Q96JE9 813 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 DHRS9Q9BPW9 319 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 NUAK2Q9H093 628 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 SYT4Q9H2B2 425 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 ASCL3Q9NQ33 180 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 TRIM36Q9NQ86 728 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 MRM2Q9UI43 246 aaKnown RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 MRPS18CQ9Y3D5 142 aaKnown RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 GRIP1Q9Y3R0 1128 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 IGKV1D-43A0A0B4J1Z2 117 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 A0A0G2JK05 382 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 PINLYPA6NC86 204 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 C11orf98E9PRG8 122 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 RGS9O75916 674 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 TNFSF15O95150 251 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 PMS2P2O95744 297 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 PLGP00747 810 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 CTRB1P17538 263 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 CELP19835 753 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 EIF1P41567 113 aaKnown RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 TAS2R43P59537 309 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 FOXO1Q12778 655 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 MELKQ14680 651 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 OXA1LQ15070 435 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 CCDC58Q4VC31 144 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 SLC22A10Q63ZE4 541 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 CTRB2Q6GPI1 263 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 JMJD6Q6NYC1 403 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 ZNF511Q8NB15 262 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 LILRB1Q8NHL6 650 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 SLC25A43Q8WUT9 341 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 S100ZQ8WXG8 99 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 RGP1Q92546 391 aaPredicted RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 MIB2Q96AX9 1013 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 SMIM19Q96E16 107 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 WDR12Q9GZL7 423 aaKnown RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 RNF32Q9H0A6 362 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 MIXL1Q9H2W2 232 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 WDR76Q9H967 626 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 ACOXLQ9NUZ1 547 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 B3GALT5Q9Y2C3 310 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 PCDHGB7Q9Y5F8 929 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms