RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 RIBC1Q8N443 379 aaPredicted RBP2.45□□□□□ -2.02
PRPF39-206ENST00000554429 CSNK1A1LQ8N752 337 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 CATSPER1Q8NEC5 780 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 OR10K1Q8NGX5 313 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 GIPC3Q8TF64 312 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 WIPF2Q8TF74 440 aaPredicted RBP2.45□□□□□ -2.02
PRPF39-206ENST00000554429 DNAJC9Q8WXX5 260 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 PIGCQ92535 297 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 DLG3Q92796 817 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 UBE2FQ969M7 185 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 SNRNP40Q96DI7 357 aaKnown RBP2.45□□□□□ -2.02
PRPF39-206ENST00000554429 PDXPQ96GD0 296 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 QKIQ96PU8 341 aaKnown RBP eCLIP2.45□□□□□ -2.02
PRPF39-206ENST00000554429 SNX18Q96RF0 628 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 TNFRSF13CQ96RJ3 184 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 JMJD8Q96S16 334 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 ATF6BQ99941 703 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 THTPAQ9BU02 230 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 KIFC1Q9BW19 673 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 CHRNA10Q9GZZ6 450 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 ATG10Q9H0Y0 220 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 KAT8Q9H7Z6 458 aaKnown RBP2.45□□□□□ -2.02
PRPF39-206ENST00000554429 FGF22Q9HCT0 170 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 KRCC1Q9NPI7 259 aaPredicted RBP2.45□□□□□ -2.02
PRPF39-206ENST00000554429 PHPT1Q9NRX4 125 aaPredicted RBP2.45□□□□□ -2.02
PRPF39-206ENST00000554429 NECAP2Q9NVZ3 263 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 MIOXQ9UGB7 285 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF223Q9UK11 482 aaPredicted RBP2.45□□□□□ -2.02
PRPF39-206ENST00000554429 DKKL1Q9UK85 242 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 POU2F3Q9UKI9 436 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 C14orf166Q9Y224 244 aaKnown RBP2.45□□□□□ -2.02
PRPF39-206ENST00000554429 FIS1Q9Y3D6 152 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 SNX10Q9Y5X0 201 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 PCSK5Q92824 1860 aa2.45□□□□□ -2.02
PRPF39-206ENST00000554429 LOC101059948A0A1B0GTJ6 334 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 A0A1W2PQJ5 194 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM82A0PJX8 343 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 MBD3L4A6NDZ8 208 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 MBD3L3A6NE82 208 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 SAC3D1A6NKF1 404 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 FAM72CH0Y354 149 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 H0Y980 276 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 M0QYG6 137 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 SULT1C2O00338 296 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 PPP6CO00743 305 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 GYG2O15488 501 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF749O43361 778 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 GRAP2O75791 330 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 TJP3O95049 919 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 OR6A2O95222 327 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ANGPTL1O95841 491 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 MT-CYBP00156 380 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 NBEAP1P0C6P0 100 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 SAGP10523 405 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 TAC1P20366 129 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 GPD1P21695 349 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ELAVL4P26378 380 aaKnown RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 DCKP27707 260 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 FMO4P31512 558 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 PMELP40967 661 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 OR3A3P47888 321 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 CSNK1A1P48729 337 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ARL4DP49703 201 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 CDK9P50750 372 aaKnown RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 CHN2P52757 468 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 DGKQP52824 942 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 MAPK12P53778 367 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 RHOAP61586 193 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 NUTF2P61970 127 aaKnown RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 CRADDP78560 199 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ADARB1P78563 741 aaKnown RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 MRPS11P82912 194 aaKnown RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 SLC25A3Q00325 362 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 TLE4Q04727 773 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 SLC34A1Q06495 639 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 PDIA2Q13087 525 aaKnown RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ARHGEF7Q14155 803 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 PSG3Q16557 428 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 CPSF6Q16630 551 aaKnown RBP eCLIP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 CDO1Q16878 200 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF542PQ5EBM4 170 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF789Q5FWF6 425 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 FAM102AQ5T9C2 384 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 FAM72AQ5TYM5 149 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 FRMPD2BQ6IN97 320 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 FAM72DQ6L9T8 149 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 CBLN3Q6UW01 205 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 IGFL3Q6UXB1 125 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 IZUMO2Q6UXV1 221 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 B3GLCTQ6Y288 498 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 RNF144BQ7Z419 303 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 TMEM144Q7Z5S9 345 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 TSPAN33Q86UF1 283 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 FAM72BQ86X60 149 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 CRLF3Q8IUI8 442 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 STHQ8IWL8 128 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF808Q8N4W9 903 aaPredicted RBP2.44□□□□□ -2.02
PRPF39-206ENST00000554429 MREGQ8N565 214 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 ST6GALNAC3Q8NDV1 305 aa2.44□□□□□ -2.02
PRPF39-206ENST00000554429 OR4K2Q8NGD2 314 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms