RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 IDH3BO43837 385 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 TRMUO75648 421 aaKnown RBP10.81□□□□□ -0.68
SHMT2-209ENST00000553949 CNOT4O95628 575 aaKnown RBP10.81□□□□□ -0.68
SHMT2-209ENST00000553949 PGA4P0DJD7 388 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 PGA3P0DJD8 388 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 CSNK1A1P48729 337 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 ASCL1P50553 236 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 CRISP1P54107 249 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 CLRN1P58418 232 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 KRR1Q13601 381 aaKnown RBP10.81□□□□□ -0.68
SHMT2-209ENST00000553949 MESTQ5EB52 335 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 PHYHD1Q5SRE7 291 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 OGFRL1Q5TC84 451 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-209ENST00000553949 SLC27A4Q6P1M0 643 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 BEND4Q6ZU67 534 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 GABRG1Q8N1C3 465 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 GPR137CQ8N3F9 429 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 LNX2Q8N448 690 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 IQCF1Q8N6M8 205 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 POMGNT2Q8NAT1 580 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 OR6N1Q8NGY5 312 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 SSC4DQ8WTU2 575 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 HDAC2Q92769 488 aaKnown RBP10.81□□□□□ -0.68
SHMT2-209ENST00000553949 TMEM54Q969K7 222 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 LRR1Q96L50 414 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 KCNK17Q96T54 332 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 ALG12Q9BV10 488 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 GABARAPL3Q9BY60 117 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 MRPL13Q9BYD1 178 aaKnown RBP10.81□□□□□ -0.68
SHMT2-209ENST00000553949 LINC00470Q9BZP3 86 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 RIBC2Q9H4K1 309 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 KCNJ16Q9NPI9 418 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 C8orf4Q9NR00 106 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 SLC7A10Q9NS82 523 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 UPB1Q9UBR1 384 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 MALT1Q9UDY8 824 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 FOXD3Q9UJU5 478 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-209ENST00000553949 ORC6Q9Y5N6 252 aa10.81□□□□□ -0.68
SHMT2-209ENST00000553949 ARHGEF9O43307 516 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 KRT33AO76009 404 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 CLDN14O95500 239 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 EPHA2P29317 976 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 NOS3P29474 1203 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 GIPRP48546 466 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 RAD23AP54725 363 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 CDK5Q00535 292 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 MYBPC1Q00872 1141 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 FAPQ12884 760 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 GINS1Q14691 196 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 PTGES3Q15185 160 aaKnown RBP10.8□□□□□ -0.68
SHMT2-209ENST00000553949 PGGHGQ32M88 737 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 FBXL19-AS1Q494R0 122 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 Q6ZT83 130 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 LINGO2Q7L985 606 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 ADCK1Q86TW2 530 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 GALNT4Q8N4A0 578 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 PACRGLQ8N7B6 248 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 SYT14Q8NB59 555 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 NOXO1Q8NFA2 376 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 ALKBH3Q96Q83 286 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-209ENST00000553949 RBM24Q9BX46 236 aaKnown RBP10.8□□□□□ -0.68
SHMT2-209ENST00000553949 SLC25A19Q9HC21 320 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 ASB6Q9NWX5 421 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 GLTPQ9NZD2 209 aa10.8□□□□□ -0.68
SHMT2-209ENST00000553949 MYO18BQ8IUG5 2567 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 PRSS37A4D1T9 235 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 ZNF587BE7ETH6 402 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 H7C1C5 153 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 AHCYL1O43865 530 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 HIST1H1CP16403 213 aaKnown RBP10.79□□□□□ -0.68
SHMT2-209ENST00000553949 CDH2P19022 906 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-209ENST00000553949 GRK5P34947 590 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 POLR2IP36954 125 aaKnown RBP10.79□□□□□ -0.68
SHMT2-209ENST00000553949 CDKN2AP42771 156 aaKnown RBP10.79□□□□□ -0.68
SHMT2-209ENST00000553949 LCN6P62502 163 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 ROR2Q01974 943 aaKnown RBP10.79□□□□□ -0.68
SHMT2-209ENST00000553949 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.79□□□□□ -0.68
SHMT2-209ENST00000553949 CD47Q08722 323 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 NPRL3Q12980 569 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 P2RY6Q15077 328 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 HIST3H3Q16695 136 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 SLC35F1Q5T1Q4 408 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 TMEM236Q5W0B7 351 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 ACSM5Q6NUN0 579 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 LRFN4Q6PJG9 635 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 PTCHD4Q6ZW05 846 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 JAZF1Q86VZ6 243 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 OR52E2Q8NGJ4 325 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 OR4K13Q8NH42 304 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 NRG4Q8WWG1 115 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 MCHR2Q969V1 340 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 NMD3Q96D46 503 aaKnown RBP10.79□□□□□ -0.68
SHMT2-209ENST00000553949 NMNAT3Q96T66 252 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 TEX12Q9BXU0 123 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 ULBP2Q9BZM5 246 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 CRLF2Q9HC73 371 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 B3GAT2Q9NPZ5 323 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 GALNT8Q9NY28 637 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 ELOVL5Q9NYP7 299 aa10.79□□□□□ -0.68
SHMT2-209ENST00000553949 NCOA6Q14686 2063 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms