RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 MRPL13Q9BYD1 178 aaKnown RBP8.19□□□□□ -1.1
CHD8-206ENST00000553870 LRMDAQ9H2I8 198 aa8.19□□□□□ -1.1
CHD8-206ENST00000553870 DENND2DQ9H6A0 471 aaPredicted RBP8.19□□□□□ -1.1
CHD8-206ENST00000553870 PLEKHF2Q9H8W4 249 aa8.19□□□□□ -1.1
CHD8-206ENST00000553870 POFUT2Q9Y2G5 429 aa8.19□□□□□ -1.1
CHD8-206ENST00000553870 LYVE1Q9Y5Y7 322 aa8.19□□□□□ -1.1
CHD8-206ENST00000553870 ABCA4P78363 2273 aa8.19□□□□□ -1.1
CHD8-206ENST00000553870 CRYBG3Q68DQ2 2970 aa8.19□□□□□ -1.1
CHD8-206ENST00000553870 CENPEQ02224 2701 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 DHRS12A0PJE2 317 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 UNC119BA6NIH7 251 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 CYSRT1A8MQ03 144 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 TNFRSF11BO00300 401 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 CDC42EP2O14613 210 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 SIAH2O43255 324 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 OR10H3O60404 316 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 TMCC2O75069 709 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 TRMUO75648 421 aaKnown RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 NDUFB2O95178 105 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 CD3EP07766 207 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 PGA4P0DJD7 388 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 PGA3P0DJD8 388 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 APEHP13798 732 aaKnown RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 FPR3P25089 353 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 LOXP28300 417 aaPredicted RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 RPL4P36578 427 aaKnown RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 GPR4P46093 362 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 GSSP48637 474 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 ZNF133P52736 654 aaPredicted RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 CLRN1P58418 232 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 KRTAP10-9P60411 292 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 CTXN1P60606 82 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 UBE2NP61088 152 aaKnown RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 LGALS3BPQ08380 585 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 SEC23BQ15437 767 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 THEM4Q5T1C6 240 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 C9orf135Q5VTT2 229 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 CARD17Q5XLA6 110 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 GPR139Q6DWJ6 353 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 LRFN4Q6PJG9 635 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 SEZ6L2Q6UXD5 910 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 DPY19L2P2Q6ZN68 376 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 LINGO2Q7L985 606 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 ZER1Q7Z7L7 766 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 ADGRG5Q8IZF4 528 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 DEPDC4Q8N2C3 294 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 ARIH2OSQ8N7S6 290 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 PAPD5Q8NDF8 572 aaKnown RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 OR52N5Q8NH56 324 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 GNPDA2Q8TDQ7 276 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 CANT1Q8WVQ1 401 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 MCHR2Q969V1 340 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 FAM46AQ96IP4 442 aaKnown RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 ALKBH3Q96Q83 286 aaPredicted RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 HS3ST6Q96QI5 342 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 RBP7Q96R05 134 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 GPX7Q96SL4 187 aaPredicted RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 ULBP2Q9BZM5 246 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 REEP1Q9H902 201 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 SMURF2Q9HAU4 748 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 CCM2LQ9NUG4 571 aaPredicted RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 CRNNQ9UBG3 495 aaPredicted RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 SLC7A8Q9UHI5 535 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 ZNF346Q9UL40 294 aaKnown RBP8.18□□□□□ -1.1
CHD8-206ENST00000553870 SIGLEC7Q9Y286 467 aa8.18□□□□□ -1.1
CHD8-206ENST00000553870 TRAV27A0A087WT01 109 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 DPRXA6NFQ7 191 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 IMPA2O14732 288 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 DHHO43323 396 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 IDH3BO43837 385 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 CCNB2O95067 398 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 CST1P01037 141 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 QDPRP09417 244 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 CBR1P16152 277 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 CDH2P19022 906 aaPredicted RBP8.17□□□□□ -1.1
CHD8-206ENST00000553870 ARR3P36575 388 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 ZNF84P51523 738 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 COX10Q12887 443 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 TSPAN31Q12999 210 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 RFX4Q33E94 735 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 PHYHD1Q5SRE7 291 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 C10orf128Q5T292 105 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 RPL13AP3Q6NVV1 102 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 SMARCD3Q6STE5 483 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 ZNF704Q6ZNC4 412 aaPredicted RBP8.17□□□□□ -1.1
CHD8-206ENST00000553870 C20orf204Q6ZNR8 217 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 ASRGL1Q7L266 308 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 SPATA24Q86W54 205 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 IL17RDQ8NFM7 739 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 OR4C15Q8NGM1 316 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 OR13C2Q8NGS9 318 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 NANOS1Q8WY41 292 aaKnown RBP8.17□□□□□ -1.1
CHD8-206ENST00000553870 ZNF837Q96EG3 531 aaPredicted RBP8.17□□□□□ -1.1
CHD8-206ENST00000553870 RSRC1Q96IZ7 334 aaKnown RBP8.17□□□□□ -1.1
CHD8-206ENST00000553870 KCNK17Q96T54 332 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 FOXB1Q99853 325 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 NRIP3Q9NQ35 241 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 GRHPRQ9UBQ7 328 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 ST6GALNAC2Q9UJ37 374 aa8.17□□□□□ -1.1
CHD8-206ENST00000553870 FBXL3Q9UKT7 428 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms