RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 RAB29O14966 203 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 MSH4O15457 936 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 EMC8O43402 210 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 SNAI2O43623 268 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 OR10H3O60404 316 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 SH3BGRLO75368 114 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 ADAP1O75689 374 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 NOL4O94818 638 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 SCELO95171 688 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 VAMP5O95183 116 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 DHFRP00374 187 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 CA1P00915 261 aaPredicted RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 GIMD1P0DJR0 217 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 PVRP15151 417 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 SDC1P18827 310 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 HMOX2P30519 316 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 PCK1P35558 622 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 CEACAM3P40198 252 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 UQCRFS1P47985 274 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 CRIP2P52943 208 aaPredicted RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 KRTAP10-9P60411 292 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 RND3P61587 244 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 ARF6P62330 175 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 RPL8P62917 257 aaKnown RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 ADARB1P78563 741 aaKnown RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 PITPNAQ00169 270 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 RIPPLY1Q0D2K3 151 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 ORC2Q13416 577 aaPredicted RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 SERTAD2Q14140 314 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 NDUFAF6Q330K2 333 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 TIGITQ495A1 244 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 CCDC58Q4VC31 144 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 C9orf66Q5T8R8 295 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 SLC22A10Q63ZE4 541 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 OR52W1Q6IF63 320 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 SLC8B1Q6J4K2 584 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 ARMCX5Q6P1M9 558 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 PRMT9Q6P2P2 845 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 EMBQ6PCB8 327 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 SMIM15Q7Z3B0 74 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 MOB3BQ86TA1 216 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 IFNEQ86WN2 208 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 ZNF100Q8IYN0 542 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 BOD1L2Q8IYS8 172 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 ENTHD1Q8IYW4 607 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 C15orf54Q8N8G6 183 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 NECAP1Q8NC96 275 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 STXBP6Q8NFX7 210 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 OR10A7Q8NGE5 316 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 OR5L2Q8NGL0 311 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 NPRL2Q8WTW4 380 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 PIH1D2Q8WWB5 315 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 ACOT11Q8WXI4 607 aaPredicted RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 CPNE4Q96A23 557 aaPredicted RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 NTAN1Q96AB6 310 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 FAM131CQ96AQ9 280 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 DGCR14Q96DF8 476 aaKnown RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 RMND5BQ96G75 393 aaPredicted RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 DNAJC1Q96KC8 554 aaKnown RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 PACRGQ96M98 296 aaPredicted RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 C9orf85Q96MD7 179 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 RNF145Q96MT1 663 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 ZNF578Q96N58 590 aaPredicted RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 ZNF251Q9BRH9 671 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 SYT11Q9BT88 431 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 TRIM15Q9C019 465 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 IKZF5Q9H5V7 419 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 LYARQ9NX58 379 aaKnown RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 USE1Q9NZ43 259 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 EHFQ9NZC4 300 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 MYEF2Q9P2K5 600 aaKnown RBP3.1□□□□□ -1.91
TDP1-207ENST00000553617 GINS2Q9Y248 185 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 NTNG1Q9Y2I2 539 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 POLDIP2Q9Y2S7 368 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 MEMO1Q9Y316 297 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 STARD10Q9Y365 291 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 CCDC171Q6TFL3 1326 aa3.1□□□□□ -1.91
TDP1-207ENST00000553617 TRBV11-1A0A0K0K1C0 115 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 RPL37AP8A6NKH3 93 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 TMEM114B3SHH9 223 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 TMEM238C9JI98 176 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 F8VP50 259 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 G3V4G9 280 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 H3BN98 237 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 RFXANKO14593 260 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 SIVA1O15304 175 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 NDUFA2O43678 99 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 LYPLA2O95372 231 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 DEXIO95424 95 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 FADS2O95864 444 aaKnown RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 MELTFP08582 738 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 UBCP0CG48 685 aaKnown RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 CBR1P16152 277 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 DTYMKP23919 212 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 ATP5A1P25705 553 aaKnown RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 STOMP27105 288 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 HLA-DMAP28067 261 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 TEAD1P28347 426 aa3.09□□□□□ -1.91
TDP1-207ENST00000553617 GTF2E2P29084 291 aaKnown RBP3.09□□□□□ -1.91
TDP1-207ENST00000553617 OR1E1P30953 314 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms