RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PGA4P0DJD7 388 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 PGA3P0DJD8 388 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 CCL2P13500 99 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 SERPINF1P36955 418 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 FMODQ06828 376 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 LAPTM4AQ15012 233 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 NANOGNBQ7Z5D8 188 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 PAQR4Q8N4S7 273 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-206ENST00000553529 SYT14Q8NB59 555 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 PCYOX1LQ8NBM8 494 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 TMEM239Q8WW34 195 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 SH3GL1Q99961 368 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 VRK1Q99986 396 aaPredicted RBP15.76■□□□□ 0.11
SHMT2-206ENST00000553529 EVA1AQ9H8M9 152 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 GID8Q9NWU2 228 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 GLTPQ9NZD2 209 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 POFUT2Q9Y2G5 429 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 CUBNO60494 3623 aa15.76■□□□□ 0.11
SHMT2-206ENST00000553529 SLC2A10O95528 541 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 ZNF14P17017 642 aaPredicted RBP15.75■□□□□ 0.11
SHMT2-206ENST00000553529 MAKP20794 623 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 GSK3BP49841 420 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 NUDT2P50583 147 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 ZP4Q12836 540 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 SNTB2Q13425 540 aaKnown RBP15.75■□□□□ 0.11
SHMT2-206ENST00000553529 RAB39AQ14964 217 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 ERICH5Q6P6B1 374 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 TBPL2Q6SJ96 375 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 LRP11Q86VZ4 500 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 ANKK1Q8NFD2 765 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 OR6X1Q8NH79 312 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 RP9Q8TA86 221 aaKnown RBP15.75■□□□□ 0.11
SHMT2-206ENST00000553529 C10orf105Q8TEF2 133 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 SGTBQ96EQ0 304 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 MPP4Q96JB8 637 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 KCNS3Q9BQ31 491 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 OR51B6Q9H340 312 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 MED4Q9NPJ6 270 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 MYEF2Q9P2K5 600 aaKnown RBP15.75■□□□□ 0.11
SHMT2-206ENST00000553529 BAG5Q9UL15 447 aa15.75■□□□□ 0.11
SHMT2-206ENST00000553529 TLN2Q9Y4G6 2542 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 CXCR6O00574 342 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 OR5F1O95221 314 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 ZNF682O95780 498 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 NPPAP01160 153 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 QDPRP09417 244 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 CDAP32320 146 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 TOP3AQ13472 1001 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-206ENST00000553529 ETFDHQ16134 617 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 CARTPTQ16568 116 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 GSG1Q2KHT4 349 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 KRTAP21-3Q3LHN1 58 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 SPATA21Q7Z572 469 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 RNF148Q8N7C7 305 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 FAM86B1Q8N7N1 296 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 FAM156AQ8NDB6 213 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 ASB10Q8WXI3 467 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 HDAC2Q92769 488 aaKnown RBP15.74■□□□□ 0.11
SHMT2-206ENST00000553529 LRR1Q96L50 414 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 MYLK2Q9H1R3 596 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 TPK1Q9H3S4 243 aa15.74■□□□□ 0.11
SHMT2-206ENST00000553529 BARX1Q9HBU1 254 aaPredicted RBP15.74■□□□□ 0.11
SHMT2-206ENST00000553529 YLPM1P49750 1951 aaKnown RBP15.74■□□□□ 0.11
SHMT2-206ENST00000553529 TRAV27A0A087WT01 109 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 FAM171A2A8MVW0 826 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 LYNX1G3V0Z9 82 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 hCG_2039718K7EN88 272 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 TRMUO75648 421 aaKnown RBP15.73■□□□□ 0.11
SHMT2-206ENST00000553529 SERPINA1P01009 418 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 LYNX1P0DP58 116 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 DRD4P21917 467 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 ARR3P36575 388 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 EFNA4P52798 201 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 ERVS71-1P61550 626 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 SELENOWP63302 87 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 DBPQ10586 325 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-206ENST00000553529 FHL1Q13642 323 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 MAD2L1BPQ15013 274 aaPredicted RBP15.73■□□□□ 0.11
SHMT2-206ENST00000553529 OTPQ5XKR4 325 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 CLEC2AQ6UVW9 174 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 ZNF627Q7L945 461 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 SLC22A24Q8N4F4 322 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 OR4K5Q8NGD3 323 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 RASSF5Q8WWW0 418 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 FAM168AQ92567 244 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 MCHR2Q969V1 340 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 ZNF566Q969W8 418 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 HSH2DQ96JZ2 352 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 PRRC1Q96M27 445 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 SYT3Q9BQG1 590 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 RHNO1Q9BSD3 238 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 MRPL37Q9BZE1 423 aaKnown RBP15.73■□□□□ 0.11
SHMT2-206ENST00000553529 PLK3Q9H4B4 646 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 YAE1D1Q9NRH1 226 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 TMEM38BQ9NVV0 291 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 EGFL7Q9UHF1 273 aa15.73■□□□□ 0.11
SHMT2-206ENST00000553529 DHHO43323 396 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 BCL10O95999 233 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 HIST1H2ABP04908 130 aa15.72■□□□□ 0.11
SHMT2-206ENST00000553529 IFI30P13284 250 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms