RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 OR4M2Q8NGB6 313 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 OR8J2Q8NGG1 315 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 OR4A15Q8NGL6 344 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 LRRC58Q96CX6 371 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 TRNT1Q96Q11 434 aaKnown RBP6.2□□□□□ -1.42
ATXN3-219ENST00000553488 PRPF18Q99633 342 aaKnown RBP6.2□□□□□ -1.42
ATXN3-219ENST00000553488 PTDSS2Q9BVG9 487 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF416Q9BWM5 594 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 MS4A5Q9H3V2 200 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF385DQ9H6B1 395 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 GRPEL1Q9HAV7 217 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 SLC52A3Q9NQ40 469 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF224Q9NZL3 707 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 SEC14L4Q9UDX3 406 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 OPN4Q9UHM6 478 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 RASD1Q9Y272 281 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 PPIAL4AQ9Y536 164 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 DSPPQ9NZW4 1301 aa6.2□□□□□ -1.42
ATXN3-219ENST00000553488 CDHR4A6H8M9 788 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 DNAJC9-AS1A6NH13 148 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 A8MVM7 634 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 VSTM5A8MXK1 200 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF99A8MXY4 864 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-219ENST00000553488 J3QLI3 93 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 PPIHO43447 177 aaKnown RBP6.19□□□□□ -1.42
ATXN3-219ENST00000553488 TRAF3IP2O43734 574 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-219ENST00000553488 PRSS23O95084 383 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 MPZL1O95297 269 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 IGHV2-5P01817 119 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 HLA-HP01893 362 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 UQCRC2P22695 453 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 CXCR1P25024 350 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 MAGEB1P43366 347 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 CCT5P48643 541 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 CLDN17P56750 224 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 SUMO1P63165 101 aaKnown RBP6.19□□□□□ -1.42
ATXN3-219ENST00000553488 EGR4Q05215 589 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 ZP4Q12836 540 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 GSTA3Q16772 222 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 PGS1Q32NB8 556 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 GPAT3Q53EU6 434 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 PHYHD1Q5SRE7 291 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 AVPI1Q5T686 147 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 REP15Q6BDI9 236 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 TMEM225Q6GV28 225 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 ACSM5Q6NUN0 579 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF836Q6ZNA1 936 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF627Q7L945 461 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 C4orf33Q8N1A6 199 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 KDM8Q8N371 416 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 BPIFB2Q8N4F0 458 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 NANPQ8TBE9 248 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 AGR3Q8TD06 166 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 C22orf15Q8WYQ4 148 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 OR2M2Q96R28 347 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 MECRQ9BV79 373 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 TAPBPLQ9BX59 468 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 C1QTNF5Q9BXJ0 243 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 UNKLQ9H9P5 680 aaKnown RBP6.19□□□□□ -1.42
ATXN3-219ENST00000553488 RLIMQ9NVW2 624 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 MKS1Q9NXB0 559 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 ARMCX1Q9P291 453 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 MID2Q9UJV3 735 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 FZR1Q9UM11 496 aa6.19□□□□□ -1.42
ATXN3-219ENST00000553488 IGLV3-9A0A075B6K5 115 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 A0A096LPI6 279 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 COPEO14579 308 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 SLC43A1O75387 559 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 BCL10O95999 233 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 SHBGP04278 402 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 DBIP07108 87 aaKnown RBP6.18□□□□□ -1.42
ATXN3-219ENST00000553488 TFPTP0C1Z6 253 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 GKN3PP0CG01 181 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 PRG2P13727 222 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 UQCRBP14927 111 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 KRT4P19013 534 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 PRTN3P24158 256 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 ALDH3A1P30838 453 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 RPS23P62266 143 aaKnown RBP6.18□□□□□ -1.42
ATXN3-219ENST00000553488 EMX2Q04743 252 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 CASP8Q14790 479 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 WHAMMP3Q1A5X7 153 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 GSG1Q2KHT4 349 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF311Q5JNZ3 666 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 DCAF12L2Q5VW00 463 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 WBP2NLQ6ICG8 309 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 LRRC74BQ6ZQY2 392 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 ZCCHC23Q6ZST2 131 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 DOK3Q7L591 496 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 RNF130Q86XS8 419 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF584Q8IVC4 421 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 WDFY1Q8IWB7 410 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 CCDC36Q8IYA8 594 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 ZNF440Q8IYI8 595 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 SIGLECL1Q8N7X8 197 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 MFSD8Q8NHS3 518 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 KIF18AQ8NI77 898 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 TESCQ96BS2 214 aa6.18□□□□□ -1.42
ATXN3-219ENST00000553488 TUBGCP3Q96CW5 907 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms