RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CRISP3P54108 245 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF92Q03936 586 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF530Q6P9A1 599 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-210ENST00000553455 TTC5Q8N0Z6 440 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 BBS5Q8N3I7 341 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF433Q8N7K0 673 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-210ENST00000553455 CEP112Q8N8E3 955 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 HSD17B11Q8NBQ5 300 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 OR7G2Q8NG99 324 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 BLOC1S5Q8TDH9 187 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 KIFAP3Q92845 792 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 RNF185Q96GF1 192 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 CENPKQ9BS16 269 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 CLMPQ9H6B4 373 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF331Q9NQX6 463 aaPredicted RBP3.4□□□□□ -1.87
SYNE2-210ENST00000553455 SLC25A37Q9NYZ2 338 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 LSM7Q9UK45 103 aaKnown RBP3.4□□□□□ -1.87
SYNE2-210ENST00000553455 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
SYNE2-210ENST00000553455 CACNG2Q9Y698 323 aa3.4□□□□□ -1.87
SYNE2-210ENST00000553455 A0A1B0GUA9 196 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 PEX7O00628 323 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 DLGAP1O14490 977 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 DNALI1O14645 258 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-210ENST00000553455 WBP4O75554 376 aaKnown RBP3.39□□□□□ -1.87
SYNE2-210ENST00000553455 EIF3GO75821 320 aaKnown RBP eCLIP3.39□□□□□ -1.87
SYNE2-210ENST00000553455 FOLR1P15328 257 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 HPGDP15428 266 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 MDKP21741 143 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-210ENST00000553455 RPS10P46783 165 aaKnown RBP3.39□□□□□ -1.87
SYNE2-210ENST00000553455 LHX2P50458 406 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 RORCP51449 518 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 CCNHP51946 323 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF133P52736 654 aaPredicted RBP3.39□□□□□ -1.87
SYNE2-210ENST00000553455 AQP6Q13520 282 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 MPPED2Q15777 294 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 GUCA2BQ16661 112 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 RFX4Q33E94 735 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 RAET1LQ5VY80 246 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 SLC8B1Q6J4K2 584 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 RNF175Q8N4F7 328 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 DTX3LQ8TDB6 740 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 ACMSDQ8TDX5 336 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 SDR42E1Q8WUS8 393 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 PIBF1Q8WXW3 757 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 DNTTIP1Q9H147 329 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 HEBP2Q9Y5Z4 205 aa3.39□□□□□ -1.87
SYNE2-210ENST00000553455 CNTNAP1P78357 1384 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 IGKV6D-41A0A0C4DH26 115 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 A6NDX4 124 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 TCP11X1B4DZS4 312 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 SGK1O00141 431 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 PPP1R2P9O14990 202 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 RFX3P48380 749 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 CCR8P51685 355 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 UGT2B15P54855 530 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 ALKBH6Q3KRA9 238 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 LY6G6FQ5SQ64 297 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 CARD17Q5XLA6 110 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 LINC00173Q6ZV60 143 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 Q8N9W7 124 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 FBXL13Q8NEE6 735 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 OR6X1Q8NH79 312 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 TMEM158Q8WZ71 300 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 AURKBQ96GD4 344 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-210ENST00000553455 ATP5SQ99766 215 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 FGF20Q9NP95 211 aaPredicted RBP3.38□□□□□ -1.87
SYNE2-210ENST00000553455 SLCO1B3Q9NPD5 702 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 GNPTGQ9UJJ9 305 aa3.38□□□□□ -1.87
SYNE2-210ENST00000553455 PDS5BQ9NTI5 1447 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 PRRC2AP48634 2157 aaKnown RBP3.37□□□□□ -1.87
SYNE2-210ENST00000553455 CDC42BPBQ9Y5S2 1711 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 IGHV3-64DA0A0J9YX35 117 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 FAM166BA8MTA8 275 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 C9JVG2 144 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 RAB29O14966 203 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 MRPS12O15235 138 aaKnown RBP3.37□□□□□ -1.87
SYNE2-210ENST00000553455 CLOCKO15516 846 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 DFNA5O60443 496 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 CLPXO76031 633 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 AGTP01019 485 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 KRT14P02533 472 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 TPM2P07951 284 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 TOP1P11387 765 aaKnown RBP3.37□□□□□ -1.87
SYNE2-210ENST00000553455 CCNCP24863 283 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 SLC26A3P40879 764 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 NCBP2P52298 156 aaKnown RBP eCLIP3.37□□□□□ -1.87
SYNE2-210ENST00000553455 RPS21P63220 83 aaKnown RBP3.37□□□□□ -1.87
SYNE2-210ENST00000553455 MRPL23Q16540 153 aaKnown RBP3.37□□□□□ -1.87
SYNE2-210ENST00000553455 IGFL2Q6UWQ7 119 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 TMEM135Q86UB9 458 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 ZNF429Q86V71 674 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 MKXQ8IYA7 352 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 PDIK1LQ8N165 341 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 MCOLN3Q8TDD5 553 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 CYYR1Q96J86 154 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 PANX1Q96RD7 426 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 GABARAPL3Q9BY60 117 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 FAM192AQ9GZU8 254 aa3.37□□□□□ -1.87
SYNE2-210ENST00000553455 OR51M1Q9H341 326 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms