RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 PRSS3P35030 304 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 ADPRHP54922 357 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 FAM122BQ7Z309 247 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 CSNK1A1LQ8N752 337 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 LSM14AQ8ND56 463 aaKnown RBP15.95■□□□□ 0.14
SYNE3-202ENST00000553340 BAHD1Q8TBE0 780 aaPredicted RBP15.95■□□□□ 0.14
SYNE3-202ENST00000553340 VSTM2LQ96N03 204 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 TWSG1Q9GZX9 223 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 Q9N2J8 555 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 IL23AQ9NPF7 189 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 IFT46Q9NQC8 304 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 HIF3AQ9Y2N7 669 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 MEIS3P1A6NDR6 274 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 KDM4BO94953 1096 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 IGF2P01344 180 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 APEHP13798 732 aaKnown RBP15.95■□□□□ 0.14
SYNE3-202ENST00000553340 EFNB2P52799 333 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 CTXN1P60606 82 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 EIF2B5Q13144 721 aaKnown RBP15.95■□□□□ 0.14
SYNE3-202ENST00000553340 GPR18Q14330 331 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.95■□□□□ 0.14
SYNE3-202ENST00000553340 PXT1Q8NFP0 134 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 OR10AC1Q8NH08 325 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 MRPS24Q96EL2 167 aaKnown RBP15.95■□□□□ 0.14
SYNE3-202ENST00000553340 LRIT1Q9P2V4 623 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 SLC6A5Q9Y345 797 aa15.95■□□□□ 0.14
SYNE3-202ENST00000553340 ELOA3DA6NLF2 546 aaPredicted RBP15.94■□□□□ 0.14
SYNE3-202ENST00000553340 PRAMEF2O60811 474 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 CD3DP04234 171 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 SDHAP31040 664 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 ELOA3BQ3SY89 546 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 ALG10Q5BKT4 473 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 TANGO2Q6ICL3 276 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 ELOA3Q8NG57 546 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 OR51A4Q8NGJ6 313 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 CCDC107Q8WV48 283 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 TSACCQ96A04 125 aaPredicted RBP15.94■□□□□ 0.14
SYNE3-202ENST00000553340 SPACA7Q96KW9 195 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 SLC38A3Q99624 504 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 ALX4Q9H161 411 aaPredicted RBP15.94■□□□□ 0.14
SYNE3-202ENST00000553340 IGKV1D-42A0A075B6H8 117 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 TVP23AA6NH52 213 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 H3BSH0 61 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 CDC40O60508 579 aaKnown RBP eCLIP15.94■□□□□ 0.14
SYNE3-202ENST00000553340 RDH16O75452 317 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 CDC123O75794 336 aaPredicted RBP15.94■□□□□ 0.14
SYNE3-202ENST00000553340 POU3F4P49335 361 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 PGDP52209 483 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 SSBP1Q04837 148 aaKnown RBP15.94■□□□□ 0.14
SYNE3-202ENST00000553340 ODF4Q2M2E3 257 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 ITPRIPL2Q3MIP1 535 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 NKAIN2Q5VXU1 208 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 STEAP1BQ6NZ63 245 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 NPSR1Q6W5P4 371 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 OR6N2Q8NGY6 317 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 OR8S1Q8NH09 359 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 OR4C3Q8NH37 302 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 DUSP19Q8WTR2 217 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 CHST6Q9GZX3 395 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 STARD5Q9NSY2 213 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 OBP2AQ9NY56 170 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 UPB1Q9UBR1 384 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 DTX4Q9Y2E6 619 aa15.94■□□□□ 0.14
SYNE3-202ENST00000553340 SPTBP11277 2137 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 FCER2P06734 321 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 UBBP0CG47 229 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 UBCP0CG48 685 aaKnown RBP15.93■□□□□ 0.14
SYNE3-202ENST00000553340 MGMTP16455 207 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 LSSP48449 732 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 RPS27AP62979 156 aaKnown RBP15.93■□□□□ 0.14
SYNE3-202ENST00000553340 UBA52P62987 128 aaKnown RBP15.93■□□□□ 0.14
SYNE3-202ENST00000553340 EGR3Q06889 387 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 RASGEF1BQ0VAM2 473 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 NNATQ16517 81 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 ZNF74Q16587 644 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 LRFN4Q6PJG9 635 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 SPRED2Q7Z698 418 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 CLEC1AQ8NC01 280 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 MCHR2Q969V1 340 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 WDR76Q9H967 626 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 HEATR5AQ86XA9 2040 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 C2orf74A8MZ97 194 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 HRKO00198 91 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 DCTN6O00399 190 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 SRPX2O60687 465 aaPredicted RBP15.93■□□□□ 0.14
SYNE3-202ENST00000553340 RASGRP1O95267 797 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 PMS2P2O95744 297 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 AGTR1P30556 359 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 ETFDHQ16134 617 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 RNF44Q7L0R7 432 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 RELL2Q8NC24 303 aaPredicted RBP15.93■□□□□ 0.14
SYNE3-202ENST00000553340 DVL3Q92997 716 aaPredicted RBP15.93■□□□□ 0.14
SYNE3-202ENST00000553340 MNTQ99583 582 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 CCDC3Q9BQI4 270 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 ULBP3Q9BZM4 244 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 SLC6A17Q9H1V8 727 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 POFUT1Q9H488 388 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 OR10H1Q9Y4A9 318 aa15.93■□□□□ 0.14
SYNE3-202ENST00000553340 A6NCN8 305 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 H3BUI4 141 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms