RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 CRLF3Q8IUI8 442 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 AQP12AQ8IXF9 295 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 MCOLN2Q8IZK6 566 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 KIF2BQ8N4N8 673 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 CLDN19Q8N6F1 224 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 GVQW1Q8N7I0 195 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 ZNF491Q8N8L2 437 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 CCDC197Q8NCU1 140 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 CCNYQ8ND76 341 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 MDS2Q8NDY4 140 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 OR1K1Q8NGR3 316 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 LINC01560Q8TB33 94 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 MRPL24Q96A35 216 aaKnown RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 LINC00167Q96N53 147 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 RAB40CQ96S21 281 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 THUMPD3Q9BV44 507 aaKnown RBP3.32□□□□□ -1.88
ATXN3-217ENST00000553287 DEFB126Q9BYW3 111 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 ATG10Q9H0Y0 220 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 DEFB127Q9H1M4 99 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 PNPLA3Q9NST1 481 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 GNPTGQ9UJJ9 305 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 AP1M2Q9Y6Q5 423 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 KIAA1549Q9HCM3 1950 aa3.32□□□□□ -1.88
ATXN3-217ENST00000553287 CHD3Q12873 2000 aaKnown RBP3.31□□□□□ -1.88
ATXN3-217ENST00000553287 SCN2AQ99250 2005 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 A0A087X0K7 114 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 A0A0J9YVX5 310 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 GLYATL1P3A0A0U1RQE8 302 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 RGSL1A5PLK6 1076 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 PINLYPA6NC86 204 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 MGAT4DA6NG13 374 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 SDR42E2A6NKP2 422 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 FAM166BA8MTA8 275 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 NPIPA2E9PIF3 369 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 G3V3Y1 287 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 RASGRF2O14827 1237 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 CALB1P05937 261 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 HEXBP07686 556 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 ZNF24P17028 368 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 GLRA1P23415 457 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 HCAR3P49019 387 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 MEOX2P50222 304 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 AIF1P55008 147 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 KRTAP10-8P60410 259 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 LCP2Q13094 533 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 TPD52L1Q16890 204 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-217ENST00000553287 GSG1Q2KHT4 349 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 CMPK2Q5EBM0 449 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 ACER2Q5QJU3 275 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 CCDC122Q5T0U0 273 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 RTL6Q6ICC9 239 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 KDELC1Q6UW63 502 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 FAM47EQ6ZV65 393 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 Q6ZVH6 145 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 C17orf64Q86WR6 236 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 LINC01555Q8NAE3 123 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 ICA1LQ8NDH6 482 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 ANKRD20A12PQ8NF67 263 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 FAM57AQ8TBR7 257 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 BLOC1S5Q8TDH9 187 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 PHF10Q8WUB8 498 aaKnown RBP3.31□□□□□ -1.88
ATXN3-217ENST00000553287 TFGQ92734 400 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-217ENST00000553287 CDKN2AIPNLQ96HQ2 116 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 CAPZA3Q96KX2 299 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 VPS35Q96QK1 796 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 AGPAT1Q99943 283 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 CITED2Q99967 270 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-217ENST00000553287 OR52A5Q9H2C5 316 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 PLEKHF2Q9H8W4 249 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 WDR54Q9H977 334 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 COG4Q9H9E3 785 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 IL1RL2Q9HB29 575 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 MRM3Q9HC36 420 aaKnown RBP3.31□□□□□ -1.88
ATXN3-217ENST00000553287 SYTL2Q9HCH5 934 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 AMBNQ9NP70 447 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 TRPC4Q9UBN4 977 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 RWDD2AQ9UIY3 292 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 ARL5AQ9Y689 179 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 PKD1L1Q8TDX9 2849 aa3.31□□□□□ -1.88
ATXN3-217ENST00000553287 SONP18583 2426 aaKnown RBP3.3□□□□□ -1.88
ATXN3-217ENST00000553287 A0A0A6YYC8 382 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-217ENST00000553287 A0A0G2JMM0 328 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 A0A1W2PPB8 328 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 A0A1W2PRS3 328 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 GOLGA6L4A6NEF3 574 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 OOEPA6NGQ2 149 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 GABRR3A8MPY1 467 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 KIR3DP1A8MWS1 328 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 GPR89AB7ZAQ6 455 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 H0Y9J4 135 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 H0YIG0 161 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 I3L1I5 382 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-217ENST00000553287 TSC22D2O75157 780 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 NME6O75414 186 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-217ENST00000553287 SLU7O95391 586 aaKnown RBP3.3□□□□□ -1.88
ATXN3-217ENST00000553287 FGFR1OPO95684 399 aaKnown RBP3.3□□□□□ -1.88
ATXN3-217ENST00000553287 HSPA4LO95757 839 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 GPR89BP0CG08 455 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 GPX3P22352 226 aa3.3□□□□□ -1.88
ATXN3-217ENST00000553287 CCNCP24863 283 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms