RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 CD226Q15762 336 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 LRRC23Q53EV4 343 aaPredicted RBP5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 CYBRD1Q53TN4 286 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 CMPK2Q5EBM0 449 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 PRAMEF20Q5VT98 475 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 TIGD3Q6B0B8 471 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 ZNF836Q6ZNA1 936 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 DHFR2Q86XF0 187 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 PLCZ1Q86YW0 608 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 AQP12AQ8IXF9 295 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 ZNF440Q8IYI8 595 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 ZNF614Q8N883 585 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 FADS6Q8N9I5 356 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 WDSUB1Q8N9V3 476 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 SMYD1Q8NB12 490 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 ZFP62Q8NB50 900 aaPredicted RBP5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 GPR32P1Q8NGA4 272 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 OR1J4Q8NGS1 313 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 SLC26A7Q8TE54 656 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 DUSP19Q8WTR2 217 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 LZICQ8WZA0 190 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 RNASE6Q93091 150 aaKnown RBP5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 CCDC124Q96CT7 223 aaKnown RBP5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 DTNBP1Q96EV8 351 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 ZNF597Q96LX8 424 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 NSMCE2Q96MF7 247 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 RAB3IPQ96QF0 476 aaPredicted RBP5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 CCL19Q99731 98 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 TRIM15Q9C019 465 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 LAT2Q9GZY6 243 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 ESRP2Q9H6T0 727 aaKnown RBP5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 ZNF696Q9H7X3 374 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 PNPLA3Q9NST1 481 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 ADPRHL2Q9NX46 363 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 KLHL28Q9NXS3 571 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 TUBA8Q9NY65 449 aaPredicted RBP5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 ICAM5Q9UMF0 924 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 BOKQ9UMX3 212 aaPredicted RBP5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 MRPS18CQ9Y3D5 142 aaKnown RBP5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 PCNX3Q9H6A9 2034 aa5.72□□□□□ -1.49
DEPDC4-210ENST00000551642 TENM3Q9P273 2699 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A0G2JMM0 328 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A1W2PPB8 328 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 A0A1W2PRS3 328 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 TCRBV3S1A0A5B6 114 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 PINLYPA6NC86 204 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 CFAP73A6NFT4 308 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 TUBAL3A6NHL2 446 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 CLDN24A6NM45 220 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 KIR3DP1A8MWS1 328 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 B4DXG7 233 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 GTPBP1O00178 669 aaKnown RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 HCRTR2O43614 444 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 CBR3O75828 277 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 OPN1SWP03999 348 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 UBTFL6P0CB48 400 aaPredicted RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 UMPSP11172 480 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 HOXB6P17509 224 aaKnown RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 ATP6V1B2P21281 511 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC6A8P48029 635 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 DNASE1L1P49184 302 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 COMPP49747 757 aaPredicted RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF136P52737 540 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 HOXA4Q00056 320 aaPredicted RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF117Q03924 483 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 PIN1Q13526 163 aaPredicted RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 CBFBQ13951 182 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 FLOT2Q14254 428 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 GANABQ14697 944 aaKnown RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 NRF1Q16656 503 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 FBXL19-AS1Q494R0 122 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 GLYR1Q49A26 553 aaPredicted RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 GLIPR1L2Q4G1C9 344 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 RGS7BPQ6MZT1 257 aaPredicted RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 CBLN3Q6UW01 205 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 IL17RELQ6ZVW7 336 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 ZNF550Q7Z398 422 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 HMGN2P46Q86SG4 172 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 COMTD1Q86VU5 262 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 CLIP4Q8N3C7 705 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 LSMEM1Q8N8F7 131 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 GATSQ8NAP1 163 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 OR2M3Q8NG83 312 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 OR5W2Q8NH69 310 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 B4GALNT2Q8NHY0 566 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 CNOT9Q92600 299 aaKnown RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 PROX1Q92786 737 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 PYURFQ96I23 114 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 LRGUKQ96M69 825 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 ARHGDIGQ99819 225 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 TTTY12Q9BZ98 90 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 POLR2J2Q9GZM3 115 aaKnown RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 POLR2J3Q9H1A7 115 aaKnown RBP5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 UBQLN3Q9H347 655 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 MAGIXQ9H6Y5 334 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 PTGES2Q9H7Z7 377 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 TMEM160Q9NX00 188 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 QPCTLQ9NXS2 382 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC13A4Q9UKG4 626 aa5.71□□□□□ -1.5
DEPDC4-210ENST00000551642 SLC9A8Q9Y2E8 581 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms