RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 SLC5A11Q8WWX8 675 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 METTL21AQ8WXB1 218 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 N4BP2L2Q92802 583 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 RIT1Q92963 219 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ST6GALNAC6Q969X2 333 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 PPWD1Q96BP3 646 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SLC47A1Q96FL8 570 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 RMND5BQ96G75 393 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 F2RL3Q96RI0 385 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ATOH8Q96SQ7 321 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 EPYCQ99645 322 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 EBNA1BP2Q99848 306 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 RHNO1Q9BSD3 238 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 WACQ9BTA9 647 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SFXN3Q9BWM7 321 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 DEFB126Q9BYW3 111 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FRMD8P1Q9BZ68 369 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SLC7A5P2Q9GIP4 190 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 WWTR1Q9GZV5 400 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 PCBD2Q9H0N5 130 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 NXF5Q9H1B4 397 aaKnown RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CXorf21Q9HAI6 301 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ANKHQ9HCJ1 492 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 FAM114A2Q9NRY5 505 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 ADPRHL2Q9NX46 363 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 CNIH4Q9P003 139 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 C6orf203Q9P0P8 240 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 PAK5Q9P286 719 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 C19orf25Q9UFG5 118 aaPredicted RBP2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SLC22A14Q9Y267 594 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 C15orf41Q9Y2V0 281 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SLC6A5Q9Y345 797 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 SNX5Q9Y5X3 404 aa2.03□□□□□ -2.08
CPSF6-207ENST00000551516 WNK1Q9H4A3 2382 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 SCN3AQ9NY46 2000 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 IGKV2D-30A0A075B6S6 120 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 IGHV4-30-2A0A087WSY4 118 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 IGLV9-49A0A0B4J1Y8 123 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 A0A0G2JN53 185 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 A0A1W2PPK0 400 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 MAGEB16A2A368 324 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 C17orf105B2RV13 164 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 NPIPB9F8W1W9 429 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 H0YIV9 168 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 ST8SIA3O43173 380 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 PHF1O43189 567 aaPredicted RBP2.02□□□□□ -2.09
CPSF6-207ENST00000551516 EMC8O43402 210 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 ERI3O43414 337 aaKnown RBP2.02□□□□□ -2.09
CPSF6-207ENST00000551516 BUB3O43684 328 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 OR1F1O43749 312 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 ZBTB14O43829 449 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 XPNPEP2O43895 674 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 CDC40O60508 579 aaKnown RBP eCLIP2.02□□□□□ -2.093e-8■■□□□ 12.1
CPSF6-207ENST00000551516 SELENOFO60613 162 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 ICOSLGO75144 302 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 UGT2B11O75310 529 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 NME6O75414 186 aaPredicted RBP2.02□□□□□ -2.09
CPSF6-207ENST00000551516 PIAS1O75925 651 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 SNX4O95219 450 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 LRATO95237 230 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 GPR75O95800 540 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 PLGP00747 810 aaPredicted RBP2.02□□□□□ -2.09
CPSF6-207ENST00000551516 ATP1B1P05026 303 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 CRHP06850 196 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 ANXA5P08758 320 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 RHOXF2BP0C7M4 288 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 FAM157CP0CG43 387 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 SLC35E2BP0CK96 405 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 SLC35E2P0CK97 266 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 CD1DP15813 335 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 PSMB1P20618 241 aaKnown RBP2.02□□□□□ -2.09
CPSF6-207ENST00000551516 DRD5P21918 477 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 GPX3P22352 226 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 CA6P23280 308 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 HNF4AP41235 474 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 MAGEA12P43365 314 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 NPBWR1P48145 328 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 TRPC1P48995 793 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 PLA2G16P53816 162 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 MTTPP55157 894 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 GPX6P59796 221 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 KCNJ10P78508 379 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 CCZ1BP86790 482 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 CCZ1P86791 482 aaPredicted RBP2.02□□□□□ -2.09
CPSF6-207ENST00000551516 VLDLRP98155 873 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 HMGCS1Q01581 520 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 SNX1Q13596 522 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 FASTKD3Q14CZ7 662 aaKnown RBP2.02□□□□□ -2.09
CPSF6-207ENST00000551516 TGFBIQ15582 683 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 C2orf76Q3KRA6 126 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 TRMT12Q53H54 448 aaKnown RBP2.02□□□□□ -2.09
CPSF6-207ENST00000551516 HSP90AA5PQ58FG0 334 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 FBXO48Q5FWF7 155 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 TOR1AIP1Q5JTV8 583 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 SLC35D3Q5M8T2 416 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 NCMAPQ5T1S8 102 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 WLSQ5T9L3 541 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 PRAMEF20Q5VT98 475 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 WBP2NLQ6ICG8 309 aa2.02□□□□□ -2.09
CPSF6-207ENST00000551516 OR4A47Q6IF82 309 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms