RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 DCAF16Q9NXF7 216 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 B3GNT2Q9NY97 397 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 CRNNQ9UBG3 495 aaPredicted RBP5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 CMAHPQ9Y471 501 aa5.86□□□□□ -1.47
PRPF40B-214ENST00000551320 M0R3H8 397 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 KPNA4O00629 521 aaPredicted RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 RGS16O15492 202 aaPredicted RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 SLC43A1O75387 559 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 SNUPNO95149 360 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 BGLAPP02818 100 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 OPN1SWP03999 348 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 GAAP10253 952 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 NQO1P15559 274 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF14P17017 642 aaPredicted RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 AHCYP23526 432 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 SERPINB5P36952 375 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 GPR6P46095 362 aaPredicted RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 CLNS1AP54105 237 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 LMO4P61968 165 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 ACTG1P63261 375 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 SQLEQ14534 574 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 TSTQ16762 297 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 CEP85LQ5SZL2 805 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 SPATA46Q5T0L3 261 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 GKAP1Q5VSY0 366 aaPredicted RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 OTPQ5XKR4 325 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 NHLRC1Q6VVB1 395 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 PEG10Q86TG7 708 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 MEX3DQ86XN8 651 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF584Q8IVC4 421 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 MSRB3Q8IXL7 192 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 CMIPQ8IY22 773 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 RIBC1Q8N443 379 aaPredicted RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 SMYD1Q8NB12 490 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 BHLHE22Q8NFJ8 381 aaPredicted RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 OR4F15Q8NGB8 312 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 MFSD8Q8NHS3 518 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 MRPL24Q96A35 216 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 MISP3Q96FF7 219 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 THOC1Q96FV9 657 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 OXGR1Q96P68 337 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 SLC6A7Q99884 636 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 SPATA9Q9BWV2 254 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 PAIP1Q9H074 479 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 SLC25A37Q9NYZ2 338 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 KLHL14Q9P2G3 628 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 P2RX2Q9UBL9 471 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 RPS6KB2Q9UBS0 482 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 CGGBP1Q9UFW8 167 aaPredicted RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 PFDN2Q9UHV9 154 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 RCE1Q9Y256 329 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 RASD1Q9Y272 281 aa5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 PRKDCP78527 4128 aaKnown RBP5.85□□□□□ -1.47
PRPF40B-214ENST00000551320 IGHV3OR16-10A0A075B7F0 116 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 A0A087WUJ7 227 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 A0A1W2PPW3 197 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 FAAHO00519 579 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 SHOX2O60902 331 aaPredicted RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 SLC22A3O75751 556 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 KRT75O95678 551 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 THY1P04216 161 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 GUSBP08236 651 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 SAGP10523 405 aaPredicted RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF35P13682 527 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 MAKP20794 623 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 GTF2E2P29084 291 aaKnown RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 POLR2JP52435 117 aaKnown RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 CRISP3P54108 245 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 BIDP55957 195 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 RAB1AP62820 205 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 LRRC74AQ0VAA2 488 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 DBPQ10586 325 aaPredicted RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 PMS2P3Q13401 168 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 SELPLGQ14242 412 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 GNA13Q14344 377 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 LARS2Q15031 903 aaKnown RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 RGNQ15493 299 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 GSTA3Q16772 222 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 GSG1Q2KHT4 349 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 PAGE3Q5JUK9 113 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 HHATQ5VTY9 493 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 ABHD12BQ7Z5M8 362 aaPredicted RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 UEVLDQ8IX04 471 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 C20orf196Q8IYI0 205 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 RFLNBQ8N5W9 214 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 C3orf56Q8N813 242 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 BVESQ8NE79 360 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 NUP37Q8NFH4 326 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 OR4D11Q8NGI4 311 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 OR6N1Q8NGY5 312 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 NEU4Q8WWR8 484 aaPredicted RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 GCDHQ92947 438 aaPredicted RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 TMEM186Q96B77 213 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 RCC1LQ96I51 464 aaKnown RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 ZIM3Q96PE6 472 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 ZBTB18Q99592 522 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 LINC00470Q9BZP3 86 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 ROPN1BQ9BZX4 212 aaPredicted RBP5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 ZNF442Q9H7R0 627 aa5.84□□□□□ -1.47
PRPF40B-214ENST00000551320 PPCSQ9HAB8 311 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms