RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 C11orf40Q8WZ69 217 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 REEP4Q9H6H4 257 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 TCF7L2Q9NQB0 619 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 BAIAP2L1Q9UHR4 511 aa11.08□□□□□ -0.64
SNRPF-203ENST00000551316 FBXO24O75426 580 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 CD55P08174 381 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 LYL1P12980 280 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 DRD4P21917 467 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 MDH2P40926 338 aaKnown RBP11.07□□□□□ -0.64
SNRPF-203ENST00000551316 CCT3P49368 545 aaKnown RBP11.07□□□□□ -0.64
SNRPF-203ENST00000551316 SELENOVP59797 346 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 BPIFB3P59826 476 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 COX10Q12887 443 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 ZNF678Q5SXM1 525 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 AP1ARQ63HQ0 302 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 FRRS1Q6ZNA5 592 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 ARFGAP2Q8N6H7 521 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 OR1J1Q8NGS3 322 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 PMM1Q92871 262 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 LHX4Q969G2 390 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 EMC6Q9BV81 110 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 PTDSS2Q9BVG9 487 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 NANOGQ9H9S0 305 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 EXOSC3Q9NQT5 275 aaKnown RBP11.07□□□□□ -0.64
SNRPF-203ENST00000551316 FAF1Q9UNN5 650 aaPredicted RBP11.07□□□□□ -0.64
SNRPF-203ENST00000551316 RASD1Q9Y272 281 aa11.07□□□□□ -0.64
SNRPF-203ENST00000551316 SERTM1A2A2V5 107 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 PRAMEF27A3QJZ7 478 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 SUPT7LO94864 414 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 HLA-DOBP13765 273 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 UQCRC2P22695 453 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 TGFBR2P37173 567 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 WNT5AP41221 380 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 ZNF75DP51815 510 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 UCP2P55851 309 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 TNFAIP6P98066 277 aaPredicted RBP11.06□□□□□ -0.64
SNRPF-203ENST00000551316 HOXA4Q00056 320 aaPredicted RBP11.06□□□□□ -0.64
SNRPF-203ENST00000551316 HABP2Q14520 560 aaPredicted RBP11.06□□□□□ -0.64
SNRPF-203ENST00000551316 FAM201AQ5SY85 155 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 THEM4Q5T1C6 240 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 LYPD2Q6UXB3 125 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 C3orf62Q6ZUJ4 267 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 C20orf196Q8IYI0 205 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 OR4F17Q8NGA8 305 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 THOC1Q96FV9 657 aaKnown RBP11.06□□□□□ -0.64
SNRPF-203ENST00000551316 OR4F4Q96R69 305 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 FOXB1Q99853 325 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 EGLN1Q9GZT9 426 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 CDH20Q9HBT6 801 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 SLC35A3Q9Y2D2 325 aa11.06□□□□□ -0.64
SNRPF-203ENST00000551316 E9PQ18 207 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 NPIPB7O75200 414 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 STX11O75558 287 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 UBL3O95164 117 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 VAMP5O95183 116 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 C6orf47O95873 294 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 HPRP00739 348 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 C1QCP02747 245 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 INHBAP08476 426 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 LSP1P33241 339 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 MAGEA12P43365 314 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 HTR3AP46098 478 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 MMP16P51512 607 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 ETF1P62495 437 aaKnown RBP11.05□□□□□ -0.64
SNRPF-203ENST00000551316 MRPS25P82663 173 aaKnown RBP11.05□□□□□ -0.64
SNRPF-203ENST00000551316 CAMK2DQ13557 499 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 TTMPQ5BVD1 217 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 C1orf140Q5VVS0 124 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 Q6ZR03 302 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 RFPL4BQ6ZWI9 263 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 NDUFA11Q86Y39 141 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 PIK3C3Q8NEB9 887 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 OR7A2PQ8NGA2 310 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 OR56A1Q8NGH5 318 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 WIPF2Q8TF74 440 aaPredicted RBP11.05□□□□□ -0.64
SNRPF-203ENST00000551316 ITLN1Q8WWA0 313 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 LRTOMTQ8WZ04 291 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 FCRL1Q96LA6 429 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 SH3GL3Q99963 347 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 TMEM246Q9BRR3 403 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 SIRPDQ9H106 197 aa11.05□□□□□ -0.64
SNRPF-203ENST00000551316 A0A1W2PRX2 142 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 ANKRD61A6NGH8 418 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 RNASEK-C17orf49H0YIS7 233 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 TMEM178BH3BS89 294 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 P2RY10O00398 339 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 TOX4O94842 621 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 SNAP29O95721 258 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 LAMP1P11279 417 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 ZNF43P17038 809 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 PITPNBP48739 271 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 SERPINB8P50452 374 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 DLX1P56177 255 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 IMPG1Q17R60 797 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 FAM153CQ494X1 144 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 RUNDC3AQ59EK9 446 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 SLC27A4Q6P1M0 643 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 ZNF841Q6ZN19 808 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 CYS1Q717R9 158 aa11.04□□□□□ -0.64
SNRPF-203ENST00000551316 SCCPDHQ8NBX0 429 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms