RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 GPR119Q8TDV5 335 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 RNF128Q8TEB7 428 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 CA5BP1Q8WTZ4 195 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 OR5P2Q8WZ92 322 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 RAB8BQ92930 207 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 RNASE6Q93091 150 aaKnown RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 TMEM18Q96B42 140 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 NEURL3Q96EH8 262 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ZBED6CLQ96FA7 236 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 PPP3R2Q96LZ3 170 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 RNF145Q96MT1 663 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 CTDSP1Q9GZU7 261 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 PAIP1Q9H074 479 aaKnown RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 OPN3Q9H1Y3 402 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 TMEM185BQ9H7F4 350 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 CHST11Q9NPF2 352 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 SDR39U1Q9NRG7 319 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-214ENST00000550893 RASSF1Q9NS23 344 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 NMRK1Q9NWW6 199 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 KCNN3Q9UGI6 736 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 TENM1Q9UKZ4 2725 aa4.27□□□□□ -1.73
SCAF11-214ENST00000550893 ATRQ13535 2644 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 MALRD1Q5VYJ5 2156 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 GOLGA8QA0A0J9YX86 632 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 RNF103-CHMP3A0A140T963 221 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 GOLGA8OA6NCC3 632 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 E9PBE3 544 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 GOLGA8NF8WBI6 632 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 FXYD1O00168 92 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 KLF11O14901 512 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SMAD9O15198 467 aaKnown RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 TPST2O60704 377 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 HSPA4LO95757 839 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 GUSBP08236 651 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 PRG2P13727 222 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 CD53P19397 219 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 PRPS1L1P21108 318 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 IL12BP29460 328 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 AGTR1P30556 359 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 HPCAL1P37235 193 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 CCT3P49368 545 aaKnown RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 RPL14P50914 215 aaKnown RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 IST1P53990 364 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 NME5P56597 212 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SEC61A1P61619 476 aaKnown RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SORDQ00796 357 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SRYQ05066 204 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 FAM27E3Q08E93 113 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SELPLGQ14242 412 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 PON3Q15166 354 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 BCL2A1Q16548 175 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SYPL1Q16563 259 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 DECR1Q16698 335 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 ATP6AP1LQ52LC2 224 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 PAGE3Q5JUK9 113 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 CPTPQ5TA50 214 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 TMEM211Q6ICI0 200 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 TNFAIP8L2Q6P589 184 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 ZCCHC12Q6PEW1 402 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 PAMR1Q6UXH9 720 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 NHLRC1Q6VVB1 395 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 STAC2Q6ZMT1 411 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 CREB3L2Q70SY1 520 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 C16orf82Q7Z2V1 217 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF550Q7Z398 422 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 NUFIP2Q7Z417 695 aaKnown RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 C6orf120Q7Z4R8 191 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 CDC20BQ86Y33 519 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 NUDCD3Q8IVD9 361 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 UBQLNLQ8IYU4 475 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 LRRC34Q8IZ02 419 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 COX18Q8N8Q8 333 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 ANKRD42Q8N9B4 389 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SETD9Q8NE22 299 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 OR10D3Q8NH80 312 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 OR14L1PQ8NHC6 308 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 LILRB1Q8NHL6 650 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SPATA3Q8NHX4 192 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 ZFP90Q8TF47 636 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 ABHD3Q8WU67 409 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 TMED6Q8WW62 240 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 CNOT9Q92600 299 aaKnown RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 INTS12Q96CB8 462 aaKnown RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 TUBGCP3Q96CW5 907 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 TMCO6Q96DC7 493 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SH3YL1Q96HL8 342 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SFXN2Q96NB2 322 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 CCDC106Q9BWC9 280 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 SFXN3Q9BWM7 321 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 PINK1Q9BXM7 581 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 NMUR2Q9GZQ4 415 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 NPFFR1Q9GZQ6 430 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 OR51I1Q9H343 314 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 HEATR1Q9H583 2144 aaKnown RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 KCNJ16Q9NPI9 418 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 PFDN4Q9NQP4 134 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 GIMAP4Q9NUV9 329 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 B4GALT7Q9UBV7 327 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF629Q9UEG4 869 aaPredicted RBP4.26□□□□□ -1.73
SCAF11-214ENST00000550893 BTNL2Q9UIR0 455 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms