RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 MUS81Q96NY9 551 aa14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 KATNB1Q9BVA0 655 aa14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 ULBP2Q9BZM5 246 aa14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 CRLF2Q9HC73 371 aa14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF226Q9NYT6 803 aa14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 GLTPQ9NZD2 209 aa14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 PDP1Q9P0J1 537 aaPredicted RBP14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 MGAT4BQ9UQ53 548 aa14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 ABCA4P78363 2273 aa14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 CACNA1DQ01668 2161 aa14.27□□□□□ -0.13
CHMP1A-209ENST00000550872 ABCA12Q86UK0 2595 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 OR5H1A6NKK0 313 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 IGHMP01871 453 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 THBDP07204 575 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 PGA4P0DJD7 388 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 PGA3P0DJD8 388 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 FASP25445 335 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 ARHGDIAP52565 204 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 ARF1P84077 181 aaKnown RBP14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 RUNX1T1Q06455 604 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 TAB1Q15750 504 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 RFX4Q33E94 735 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 THSD4Q6ZMP0 1018 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 C10orf67Q8IYJ2 551 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF295-AS1Q8N0V1 137 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 SYT14Q8NB59 555 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 FANK1Q8TC84 345 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 PYDC1Q8WXC3 89 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 HSD17B8Q92506 261 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 GTPBP3Q969Y2 492 aaKnown RBP14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 MUCL1Q96DR8 90 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 TSPAN32Q96QS1 320 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 DGCR6LQ9BY27 220 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 OR52D1Q9H346 318 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 DENND2DQ9H6A0 471 aaPredicted RBP14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 GRHPRQ9UBQ7 328 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 IL20RAQ9UHF4 553 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 POFUT2Q9Y2G5 429 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 ADAM18Q9Y3Q7 739 aa14.26□□□□□ -0.13
CHMP1A-209ENST00000550872 A6NIZ1 184 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 CENPBD1B2RD01 187 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 FCGR1AP12314 374 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 GSTM3P21266 225 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 PRKACGP22612 351 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 SLC6A6P31641 620 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 SH3BGRP55822 239 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 FXYD6P3P58550 94 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 RAP1BP61224 184 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 RAP1AP62834 184 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 MYBPC1Q00872 1141 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 DAZAP2Q15038 168 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 ATP6AP1Q15904 470 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 TIMM23BQ5SRD1 257 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 FAM205BPQ63HN1 556 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 LRFN4Q6PJG9 635 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 DPY19L2P2Q6ZN68 376 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 AMIGO2Q86SJ2 522 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 P2RY8Q86VZ1 359 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 ARIH2OSQ8N7S6 290 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 C1orf162Q8NEQ5 155 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 NOXO1Q8NFA2 376 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 OR1K1Q8NGR3 316 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 HDAC2Q92769 488 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF837Q96EG3 531 aaPredicted RBP14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 SAMD8Q96LT4 415 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 Q96M85 177 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 FEVQ99581 238 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 BDH2Q9BUT1 245 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 MRPL13Q9BYD1 178 aaKnown RBP14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 NTN4Q9HB63 628 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 NRIP3Q9NQ35 241 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 IER3IP1Q9Y5U9 82 aa14.25□□□□□ -0.13
CHMP1A-209ENST00000550872 A0A1W2PR80 420 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 ARRDC5A6NEK1 342 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 PPP1R3DO95685 299 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 QDPRP09417 244 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 CRYGSP22914 178 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 SSTR2P30874 369 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 HOXC12P31275 282 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 RPS6KA3P51812 740 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 TLE4Q04727 773 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 CD47Q08722 323 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 PPA1Q15181 289 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 GPR139Q6DWJ6 353 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF620Q6ZNG0 422 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 RASSF6Q6ZTQ3 369 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 HS3ST5Q8IZT8 346 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 C17orf78Q8N4C9 275 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 OR52N5Q8NH56 324 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF519Q8TB69 540 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 LRTOMTQ8WZ04 291 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 BCL2L2Q92843 193 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 C14orf79Q96F83 325 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 ZNF570Q96NI8 536 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 GPX7Q96SL4 187 aaPredicted RBP14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 KCNK17Q96T54 332 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 IFT27Q9BW83 186 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 SLC17A5Q9NRA2 495 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 CDH10Q9Y6N8 788 aa14.24□□□□□ -0.13
CHMP1A-209ENST00000550872 A0A096LPE4 126 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms