RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 DDOQ99489 341 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 IFT27Q9BW83 186 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 TSSK6Q9BXA6 273 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 MALT1Q9UDY8 824 aa11.49□□□□□ -0.57
RAB5C-206ENST00000550406 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 GCN1Q92616 2671 aaKnown RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 IGKV1D-43A0A0B4J1Z2 117 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 TEX13CA0A0J9YWL9 993 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 RPL36A-HNRNPH2H7BZ11 118 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 H7C1C5 153 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 M0R3G1 203 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 AKAP8O43823 692 aaKnown RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 ALPLP05186 524 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 APEHP13798 732 aaKnown RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 COX5AP20674 150 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 EPHA2P29317 976 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 SDHAP31040 664 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 CDKN2AP42771 156 aaKnown RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 PCYT1AP49585 367 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 ZNF133P52736 654 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 LCN6P62502 163 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 CDK5Q00535 292 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 MYBPC1Q00872 1141 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 DBPQ10586 325 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 SNTB1Q13884 538 aaKnown RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 SFRP5Q5T4F7 317 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 RPL13AP3Q6NVV1 102 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 UBE2J2Q8N2K1 259 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 PARP8Q8N3A8 854 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 LNX2Q8N448 690 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 CBR4Q8N4T8 237 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 IQCF1Q8N6M8 205 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 ZNF433Q8N7K0 673 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 SYT14Q8NB59 555 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 ACBD4Q8NC06 268 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 MAGEE2Q8TD90 523 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 ZNF566Q969W8 418 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 ALKBH3Q96Q83 286 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 DCLRE1BQ9H816 532 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 ZNF556Q9HAH1 456 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 PAPOLBQ9NRJ5 636 aaKnown RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 TBC1D23Q9NUY8 699 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 ELOVL5Q9NYP7 299 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 USE1Q9NZ43 259 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 GLTPQ9NZD2 209 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 STX18Q9P2W9 335 aaKnown RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 UPB1Q9UBR1 384 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 POFUT2Q9Y2G5 429 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 KLF2Q9Y5W3 355 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-206ENST00000550406 ICE1Q9Y2F5 2266 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 DOPEY2Q9Y3R5 2298 aa11.48□□□□□ -0.57
RAB5C-206ENST00000550406 A1L4Q6 167 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 CENPBD1B2RD01 187 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 E9PQ18 207 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 EI24O14681 340 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 ARHGEF9O43307 516 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 MGRN1O60291 552 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 LYZL6O75951 148 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 IGHG1P01857 330 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 HIST1H1CP16403 213 aaKnown RBP11.47□□□□□ -0.57
RAB5C-206ENST00000550406 IGFBP2P18065 325 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 PSMB1P20618 241 aaKnown RBP11.47□□□□□ -0.57
RAB5C-206ENST00000550406 MPGP29372 298 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 POLR2IP36954 125 aaKnown RBP11.47□□□□□ -0.57
RAB5C-206ENST00000550406 GIPRP48546 466 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 CSNK1A1P48729 337 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 RPS6KA3P51812 740 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 CRISP1P54107 249 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 ROR2Q01974 943 aaKnown RBP11.47□□□□□ -0.57
RAB5C-206ENST00000550406 FMODQ06828 376 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 KRR1Q13601 381 aaKnown RBP11.47□□□□□ -0.57
RAB5C-206ENST00000550406 DAG1Q14118 895 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 GINS1Q14691 196 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 SLC35F1Q5T1Q4 408 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 C9orf135Q5VTT2 229 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 TMEM236Q5W0B7 351 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 LPCAT4Q643R3 524 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 GPR139Q6DWJ6 353 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 SLC25A47Q6Q0C1 308 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 GPR137CQ8N3F9 429 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 NOXO1Q8NFA2 376 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 OR6N1Q8NGY5 312 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 DNAJC9Q8WXX5 260 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 MCHR2Q969V1 340 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 ZNF570Q96NI8 536 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 RBM4BQ9BQ04 359 aaKnown RBP11.47□□□□□ -0.57
RAB5C-206ENST00000550406 C9orf16Q9BUW7 83 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 ALG12Q9BV10 488 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 RBM4Q9BWF3 364 aaKnown RBP11.47□□□□□ -0.57
RAB5C-206ENST00000550406 NELFAQ9H3P2 528 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 KRT84Q9NSB2 600 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 ASB6Q9NWX5 421 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 KIF17Q9P2E2 1029 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 GRHPRQ9UBQ7 328 aa11.47□□□□□ -0.57
RAB5C-206ENST00000550406 FASNP49327 2511 aaKnown RBP11.47□□□□□ -0.57
RAB5C-206ENST00000550406 SLC22A23A1A5C7 686 aa11.46□□□□□ -0.57
RAB5C-206ENST00000550406 A6NIZ1 184 aa11.46□□□□□ -0.57
RAB5C-206ENST00000550406 OR6C65A6NJZ3 312 aa11.46□□□□□ -0.57
RAB5C-206ENST00000550406 H3BN98 237 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms