RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 SLC19A3Q9BZV2 496 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 RAB1BQ9H0U4 201 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 GLTPQ9NZD2 209 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 ZNF224Q9NZL3 707 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 BAG5Q9UL15 447 aa14.13□□□□□ -0.15
VPS29-207ENST00000549970 SH3PXD2BA1X283 911 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 BLOC1S5-TXNDC5H3BN57 136 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 RAB36O95755 333 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 NPPAP01160 153 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 ASAH2BP0C7U1 165 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 OR1E2P47887 323 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 GIPRP48546 466 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 GUCY1A3Q02108 690 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 LRRC23Q53EV4 343 aaPredicted RBP14.12□□□□□ -0.15
VPS29-207ENST00000549970 ERICH5Q6P6B1 374 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 HIPK1Q86Z02 1210 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 NKAIN4Q8IVV8 208 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 ZCCHC24Q8N2G6 241 aaKnown RBP14.12□□□□□ -0.15
VPS29-207ENST00000549970 PCYOX1LQ8NBM8 494 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 PFN4Q8NHR9 129 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 C10orf82Q8WW14 230 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 ZNF566Q969W8 418 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 ZNF583Q96ND8 569 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 MEPEQ9NQ76 525 aaPredicted RBP14.12□□□□□ -0.15
VPS29-207ENST00000549970 ZNF446Q9NWS9 450 aa14.12□□□□□ -0.15
VPS29-207ENST00000549970 RTTNQ86VV8 2226 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 SVEP1Q4LDE5 3571 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 VWC2LB2RUY7 222 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 NDUFS8O00217 210 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 UBL3O95164 117 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 BCL10O95999 233 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 MT-ND1P03886 318 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 PATE4P0C8F1 98 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 IGHV4-31P0DP07 118 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 ZNF14P17017 642 aaPredicted RBP14.11□□□□□ -0.15
VPS29-207ENST00000549970 ZNF16P17020 682 aaPredicted RBP14.11□□□□□ -0.15
VPS29-207ENST00000549970 NR4A2P43354 598 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 UGT2B15P54855 530 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 RAB1AP62820 205 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 LSM11P83369 360 aaKnown RBP eCLIP14.11□□□□□ -0.159e-7■■■□□ 16.4
VPS29-207ENST00000549970 PIN1Q13526 163 aaPredicted RBP14.11□□□□□ -0.15
VPS29-207ENST00000549970 CHRFAM7AQ494W8 412 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 CYB5R2Q6BCY4 276 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 SKA3Q8IX90 412 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 CDK20Q8IZL9 346 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 TMEM255BQ8WV15 326 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 SLC25A44Q96H78 314 aaPredicted RBP14.11□□□□□ -0.15
VPS29-207ENST00000549970 ZNF75AQ96N20 296 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 FOXN4Q96NZ1 517 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 DOK1Q99704 481 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 DYNLRB1Q9NP97 96 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 MYOZ1Q9NP98 299 aaPredicted RBP14.11□□□□□ -0.15
VPS29-207ENST00000549970 GID8Q9NWU2 228 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 ARMCX1Q9P291 453 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 RIMS3Q9UJD0 308 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 FBXO9Q9UK97 447 aaPredicted RBP14.11□□□□□ -0.15
VPS29-207ENST00000549970 CMAHPQ9Y471 501 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 CAPN7Q9Y6W3 813 aa14.11□□□□□ -0.15
VPS29-207ENST00000549970 LOC390937A0A1W2PQ73 354 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 TMEM129A0AVI4 362 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 FAM220BPB1ANY3 271 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 OR7A10O76100 309 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 OR5F1O95221 314 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 IFNA14P01570 189 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 F13BP05160 661 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 ERCC1P07992 297 aaPredicted RBP14.1□□□□□ -0.15
VPS29-207ENST00000549970 PGA4P0DJD7 388 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 PGA3P0DJD8 388 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 NR4A1P22736 598 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 RPL18Q07020 188 aaKnown RBP14.1□□□□□ -0.15
VPS29-207ENST00000549970 RAB39AQ14964 217 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 IQCCQ4KMZ1 466 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 CYBRD1Q53TN4 286 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 GKAP1Q5VSY0 366 aaPredicted RBP14.1□□□□□ -0.15
VPS29-207ENST00000549970 LRFN4Q6PJG9 635 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 PIWIL3Q7Z3Z3 882 aaKnown RBP14.1□□□□□ -0.15
VPS29-207ENST00000549970 SLC22A24Q8N4F4 322 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 POU5F2Q8N7G0 328 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 FGFBP3Q8TAT2 258 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 TMEM239Q8WW34 195 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 RCN3Q96D15 328 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 SGTBQ96EQ0 304 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 TPD52L3Q96J77 140 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 KCNK17Q96T54 332 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 C20orf141Q9NUB4 165 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 TMEM38BQ9NVV0 291 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 SPEF1Q9Y4P9 236 aa14.1□□□□□ -0.15
VPS29-207ENST00000549970 IGHV4-61A0A0C4DH41 118 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 MCIDASD6RGH6 385 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 DHHO43323 396 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 IGHG1P01857 330 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 QDPRP09417 244 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 ZNF35P13682 527 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 FUT1P19526 365 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 KDELR2P33947 212 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 RBM34P42696 430 aaKnown RBP14.09□□□□□ -0.15
VPS29-207ENST00000549970 CLRN1P58418 232 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 MYBPC1Q00872 1141 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 GALK2Q01415 458 aa14.09□□□□□ -0.15
VPS29-207ENST00000549970 RUNX1T1Q06455 604 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms