RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 ACKR1Q16570 336 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 ZNF425Q6IV72 752 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 CORO6Q6QEF8 472 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 TSPAN10Q9H1Z9 355 aaPredicted RBP14.89□□□□□ -0.03
CUX1-213ENST00000549414 METTL17Q9H7H0 456 aaPredicted RBP14.89□□□□□ -0.03
CUX1-213ENST00000549414 CGGBP1Q9UFW8 167 aaPredicted RBP14.89□□□□□ -0.03
CUX1-213ENST00000549414 FBXL4Q9UKA2 621 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 PCDHGA3Q9Y5H0 932 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 ANK1P16157 1881 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 TMEM212A6NML5 194 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 UBL3O95164 117 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 IGHA2P01877 340 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 ARHGDIBP52566 201 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 LRRC69Q6ZNQ3 347 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 OR5H2Q8NGV7 314 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 ARHGDIGQ99819 225 aa14.89□□□□□ -0.03
CUX1-213ENST00000549414 LOC285556D6RIA3 1793 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 IGHV5-51A0A0C4DH38 117 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 SULT1C4O75897 302 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 AKAIN1P0CW23 69 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 DPP4P27487 766 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 HOXD12P35452 270 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 GPLD1P80108 840 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 STK11Q15831 433 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 FCRL6Q6DN72 434 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 OR8D4Q8NGM9 314 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 DVL3Q92997 716 aaPredicted RBP14.88□□□□□ -0.03
CUX1-213ENST00000549414 IL20Q9NYY1 176 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 METTL12A8MUP2 240 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 TBX19O60806 448 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 SPDEFO95238 335 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 FXYD4P59646 89 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 FAM53BQ14153 422 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 SEMA4CQ9C0C4 833 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 PSME4Q14997 1843 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 CDC42EP2O14613 210 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 LILRB5O75023 590 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 VEGFCP49767 419 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 DUSP2Q05923 314 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 SSX1Q16384 188 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 C11orf91Q3C1V1 193 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 UBE2NLQ5JXB2 153 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 LINC00299Q6ZSB3 139 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 DCXRQ7Z4W1 244 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 HAVCR2Q8TDQ0 301 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 ASB17Q8WXJ9 295 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 SIAEQ9HAT2 523 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 ZNF346Q9UL40 294 aaKnown RBP14.88□□□□□ -0.03
CUX1-213ENST00000549414 A0A1W2PNR3 127 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 LMO7DNF2Z398 122 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 RAB40ALP0C0E4 278 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 CASP6P55212 293 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 GLCCI1Q86VQ1 547 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 RAB40AQ8WXH6 277 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 CHRDQ9H2X0 955 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 KLHL13Q9P2N7 655 aa14.88□□□□□ -0.03
CUX1-213ENST00000549414 TCRBP04435 133 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 CSF1P09603 554 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 CD79AP11912 226 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 GABRR1P24046 479 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 DIO1P49895 249 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 GLYATL3Q5SZD4 288 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 GRINAQ7Z429 371 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 CCDC54Q8NEL0 328 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 SPTSSAQ969W0 71 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 ZNF700Q9H0M5 742 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 C1orf198Q9H425 327 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 MAN2C1Q9NTJ4 1040 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 GGT3PA6NGU5 568 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 TRIM64CA6NLI5 447 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 C5orf67F2Z3F1 127 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 MTRF1O75570 445 aaKnown RBP14.87□□□□□ -0.03
CUX1-213ENST00000549414 SC5DO75845 299 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 APOC1P02654 83 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 SERPINA5P05154 406 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 C21orf58P58505 322 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 THSD4Q6ZMP0 1018 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 SLC16A9Q7RTY1 509 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
CUX1-213ENST00000549414 GPR119Q8TDV5 335 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 GCDHQ92947 438 aaPredicted RBP14.87□□□□□ -0.03
CUX1-213ENST00000549414 GABRG3Q99928 467 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 ARRDC1-AS1Q9H2J1 176 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 MED29Q9NX70 200 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 CTSFQ9UBX1 484 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 EXO1Q9UQ84 846 aaKnown RBP14.87□□□□□ -0.03
CUX1-213ENST00000549414 FABP7O15540 132 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 IL9P15248 144 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 PSMB1P20618 241 aaKnown RBP14.87□□□□□ -0.03
CUX1-213ENST00000549414 SERPINA2P20848 420 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 DGCR2P98153 550 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 ELMOD2Q8IZ81 293 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 SPEM1Q8N4L4 309 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 SLC5A7Q9GZV3 580 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 FGF20Q9NP95 211 aaPredicted RBP14.87□□□□□ -0.03
CUX1-213ENST00000549414 TAS2R3Q9NYW6 316 aa14.87□□□□□ -0.03
CUX1-213ENST00000549414 hCG_1807616A0A1W2PRN6 198 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 TRABD2BA6NFA1 517 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 NAP1L6A6NFF2 107 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 ATP1B1P05026 303 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms