RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ELF4Q99607 663 aaPredicted RBP12.85□□□□□ -0.35
RAPGEF3-218ENST00000548919 GAL3ST1Q99999 423 aa12.85□□□□□ -0.35
RAPGEF3-218ENST00000548919 TMEM138Q9NPI0 162 aa12.85□□□□□ -0.35
RAPGEF3-218ENST00000548919 LAMP5Q9UJQ1 280 aa12.85□□□□□ -0.35
RAPGEF3-218ENST00000548919 ERVK-19Q9WJR5 959 aa12.85□□□□□ -0.35
RAPGEF3-218ENST00000548919 TRBV5-5A0A0J9YX44 114 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 TMEM272A0A1B0GTI8 110 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 A0A1W2PQF6 199 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 OR6C65A6NJZ3 312 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 H7C417 338 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 XRCC3O43542 346 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 EGFP01133 1207 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 MAOAP21397 527 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 DLX5P56178 289 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 RBMS2Q15434 407 aaKnown RBP12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 ITPRIPL2Q3MIP1 535 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 ALG10Q5BKT4 473 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 PRSS35Q8N3Z0 413 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 EXD3Q8N9H8 876 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 ST8SIA4Q92187 359 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 GAS2L1Q99501 681 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 TMPRSS13Q9BYE2 586 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 TTYH1Q9H313 450 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 Q9N2J8 555 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 CPNE7Q9UBL6 633 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 MTFP1Q9UDX5 166 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 ETV7Q9Y603 341 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 TDRD6O60522 2096 aaKnown RBP12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 TRAV18A0A075B6X5 111 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 SLC22A23A1A5C7 686 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 UBE2QL1A1L167 161 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 TUBAL3A6NHL2 446 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 OR4C45A6NMZ5 311 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 EFCAB7A8K855 629 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 IGF2P01344 180 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 GTF2F2P13984 249 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 ST6GAL1P15907 406 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 MAPK3P27361 379 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 MECP2P51608 486 aaKnown RBP12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 CD226Q15762 336 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 ZNF74Q16587 644 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 METTL27Q8N6F8 245 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 OR2AK2Q8NG84 335 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 OR2G2Q8NGZ5 317 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 RSC1A1Q92681 617 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 OBP2AQ9NY56 170 aa12.84□□□□□ -0.35
RAPGEF3-218ENST00000548919 A0A0J9YY10 115 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 GGT3PA6NGU5 568 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 C5orf67F2Z3F1 127 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 SIGLEC5O15389 551 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 CTAG2O75638 210 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 SPDEFO95238 335 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 CD14P08571 375 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 HOXB2P14652 356 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 GABRA1P14867 456 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 CSRP1P21291 193 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 NTSR1P30989 418 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 MAZP56270 477 aaKnown RBP12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 SIGLEC14Q08ET2 396 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 GPM6BQ13491 265 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 GSG1LQ6UXU4 331 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZNF227Q86WZ6 799 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 CDC20BQ86Y33 519 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 LHFPL5Q8TAF8 219 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 SCARB1Q8WTV0 552 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 TNFAIP8L1Q8WVP5 186 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 TWSG1Q9GZX9 223 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 SFXN1Q9H9B4 322 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 STEAP1Q9UHE8 339 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 FBXL2Q9UKC9 423 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 A0A1B0GTQ1 180 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 F5H5P2 479 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 LDOC1O95751 146 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 CD3DP04234 171 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 ITGA5P08648 1049 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 GRM7Q14831 915 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 MESTQ5EB52 335 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 FAM109BQ6ICB4 259 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 C11orf88Q6PI97 169 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 DNM1P46Q6ZS02 220 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 PPP1R14AQ96A00 147 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 FAM131CQ96AQ9 280 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 GPX7Q96SL4 187 aaPredicted RBP12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 LPAR4Q99677 370 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 G6PC3Q9BUM1 346 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 SHARPINQ9H0F6 387 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 SESN1Q9Y6P5 492 aa12.83□□□□□ -0.36
RAPGEF3-218ENST00000548919 ATP6V1G2-DDX39BF2Z307 99 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 B3GALNT1O75752 331 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 CA3P07451 260 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 SDHAP31040 664 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 POU3F4P49335 361 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 SORDQ00796 357 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 EGR4Q05215 589 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 RPL18Q07020 188 aaKnown RBP12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 ZMYND11Q15326 602 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 C4orf46Q504U0 113 aa12.82□□□□□ -0.36
RAPGEF3-218ENST00000548919 NKAIN2Q5VXU1 208 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms