RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ACSM5Q6NUN0 579 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 HMGN2P46Q86SG4 172 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 MDP1Q86V88 176 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 LSRQ86X29 649 aaPredicted RBP11.6□□□□□ -0.55
CDX2-202ENST00000548877 ZNF440Q8IYI8 595 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 TESCQ96BS2 214 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 CCDC124Q96CT7 223 aaKnown RBP11.6□□□□□ -0.55
CDX2-202ENST00000548877 SLC6A7Q99884 636 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 TAPBPLQ9BX59 468 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 MTHFD2LQ9H903 347 aaPredicted RBP11.6□□□□□ -0.55
CDX2-202ENST00000548877 NTN4Q9HB63 628 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 CRLF2Q9HC73 371 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 GPR35Q9HC97 309 aa11.6□□□□□ -0.55
CDX2-202ENST00000548877 A0A096LPI6 279 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 A0A0G2JMP0 313 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 A0A0X1KG70 313 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 PRSS51A0A1B0GVH4 220 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 HMGN4O00479 90 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 DEAF1O75398 565 aaPredicted RBP11.59□□□□□ -0.55
CDX2-202ENST00000548877 BCL10O95999 233 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 CHRM4P08173 479 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 HSD17B1P14061 328 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 S100A3P33764 101 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 ACAA2P42765 397 aaKnown RBP11.59□□□□□ -0.55
CDX2-202ENST00000548877 TXNL4AP83876 142 aaKnown RBP11.59□□□□□ -0.55
CDX2-202ENST00000548877 SLC34A1Q06495 639 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 LRRC74AQ0VAA2 488 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 TRIM25Q14258 630 aaKnown RBP11.59□□□□□ -0.55
CDX2-202ENST00000548877 GNA13Q14344 377 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 RCN1Q15293 331 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 FXNQ16595 210 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 GPAT3Q53EU6 434 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 MRPL2Q5T653 305 aaKnown RBP11.59□□□□□ -0.55
CDX2-202ENST00000548877 C1orf140Q5VVS0 124 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 PRAMEF8Q5VWM4 474 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 PRAMEF7Q5VXH5 474 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 LRRC74BQ6ZQY2 392 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 ZNF627Q7L945 461 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 OR4M2Q8NGB6 313 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 OR4A15Q8NGL6 344 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 MFSD8Q8NHS3 518 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 NANPQ8TBE9 248 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 STK35Q8TDR2 534 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 POP5Q969H6 163 aaKnown RBP11.59□□□□□ -0.55
CDX2-202ENST00000548877 VCX3BQ9H321 246 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 NARFLQ9H6Q4 476 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 ADPRHL2Q9NX46 363 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 ABCD2Q9UBJ2 740 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 DSPPQ9NZW4 1301 aa11.59□□□□□ -0.55
CDX2-202ENST00000548877 LOC102725191A0A1B0GVB3 256 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 ZNF99A8MXY4 864 aaPredicted RBP11.58□□□□□ -0.56
CDX2-202ENST00000548877 PPIHO43447 177 aaKnown RBP11.58□□□□□ -0.56
CDX2-202ENST00000548877 PLPP2O43688 288 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 NCR1O76036 304 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 DBIP07108 87 aaKnown RBP11.58□□□□□ -0.56
CDX2-202ENST00000548877 ZNF14P17017 642 aaPredicted RBP11.58□□□□□ -0.56
CDX2-202ENST00000548877 ADRA2CP18825 462 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 GATA3P23771 443 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 SLC7A2P52569 658 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 HPCAP84074 193 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 NPRL3Q12980 569 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 CEACAM16Q2WEN9 425 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 ANXA8L1Q5VT79 327 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 WBP2NLQ6ICG8 309 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 DHDDSQ86SQ9 333 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 RETREG3Q86VR2 466 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 BPIFB2Q8N4F0 458 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 ANKFN1Q8N957 763 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 SLC26A7Q8TE54 656 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 DVL3Q92997 716 aaPredicted RBP11.58□□□□□ -0.56
CDX2-202ENST00000548877 ZNF837Q96EG3 531 aaPredicted RBP11.58□□□□□ -0.56
CDX2-202ENST00000548877 ITCHQ96J02 903 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 LRGUKQ96M69 825 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 ZNF665Q9H7R5 613 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 S100A14Q9HCY8 104 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 DDX28Q9NUL7 540 aaKnown RBP11.58□□□□□ -0.56
CDX2-202ENST00000548877 B3GAT1Q9P2W7 334 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 CD300AQ9UGN4 299 aa11.58□□□□□ -0.56
CDX2-202ENST00000548877 CDHR4A6H8M9 788 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 POM121CA8CG34 1229 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 SLC43A1O75387 559 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 KRT36O76013 467 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 MPZL1O95297 269 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 ARAFP10398 606 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 PNMTP11086 282 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 IL7RP16871 459 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 ZNF43P17038 809 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 TCN1P20061 433 aaPredicted RBP11.57□□□□□ -0.56
CDX2-202ENST00000548877 IL12AP29459 219 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 ALDH3B1P43353 468 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 CLDN17P56750 224 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 RPS23P62266 143 aaKnown RBP11.57□□□□□ -0.56
CDX2-202ENST00000548877 SYPL1Q16563 259 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 LRP11Q86VZ4 500 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 TMEM123Q8N131 208 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 GPR137CQ8N3F9 429 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 SYT14Q8NB59 555 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 VPS37AQ8NEZ2 397 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 OR8J3Q8NGG0 315 aa11.57□□□□□ -0.56
CDX2-202ENST00000548877 VPS33AQ96AX1 596 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms