RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 COPS8Q99627 209 aa1.68□□□□□ -2.14
CCDC38-206ENST00000548771 GABARAPL3Q9BY60 117 aa1.68□□□□□ -2.14
CCDC38-206ENST00000548771 LY9Q9HBG7 655 aa1.68□□□□□ -2.14
CCDC38-206ENST00000548771 MCCC2Q9HCC0 563 aa1.68□□□□□ -2.14
CCDC38-206ENST00000548771 SIRT7Q9NRC8 400 aa1.68□□□□□ -2.14
CCDC38-206ENST00000548771 PTBP2Q9UKA9 531 aaKnown RBP1.68□□□□□ -2.14
CCDC38-206ENST00000548771 CDH9Q9ULB4 789 aa1.68□□□□□ -2.14
CCDC38-206ENST00000548771 DDX49Q9Y6V7 483 aaKnown RBP1.68□□□□□ -2.14
CCDC38-206ENST00000548771 PNPLA6Q8IY17 1366 aa1.68□□□□□ -2.14
CCDC38-206ENST00000548771 DOCK8Q8NF50 2099 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 A0A1W2PP18 115 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 PLAC8L1A1L4L8 177 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 INS-IGF2F8WCM5 200 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 MGRN1O60291 552 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 CLDN9O95484 217 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 IGKV1D-16P01601 117 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 GAPDHP04406 335 aaKnown RBP1.67□□□□□ -2.14
CCDC38-206ENST00000548771 PTMAP06454 111 aaKnown RBP1.67□□□□□ -2.14
CCDC38-206ENST00000548771 IGHV3-43DP0DP04 118 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 NCK1P16333 377 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 GRIA1P42261 906 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 GPR6P46095 362 aaPredicted RBP1.67□□□□□ -2.14
CCDC38-206ENST00000548771 CCT3P49368 545 aaKnown RBP1.67□□□□□ -2.14
CCDC38-206ENST00000548771 SUB1P53999 127 aaKnown RBP eCLIP1.67□□□□□ -2.14
CCDC38-206ENST00000548771 AQP6Q13520 282 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 PRSS8Q16651 343 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 EXOC3L2Q2M3D2 409 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 TTLL9Q3SXZ7 439 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 CCDC152Q4G0S7 254 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 ENPP6Q6UWR7 440 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 LYPD2Q6UXB3 125 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 GET4Q7L5D6 327 aaPredicted RBP1.67□□□□□ -2.14
CCDC38-206ENST00000548771 GPATCH11Q8N954 259 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 OR2T3Q8NH03 318 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 SGK3Q96BR1 496 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 ERP44Q9BS26 406 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 PARD6BQ9BYG5 372 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 SPNS1Q9H2V7 528 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 NOX3Q9HBY0 568 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 SLC40A1Q9NP59 571 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 EPS15L1Q9UBC2 864 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 CD84Q9UIB8 345 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 ZNF222Q9UK12 451 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 ISY1Q9ULR0 285 aaKnown RBP1.67□□□□□ -2.14
CCDC38-206ENST00000548771 PACSIN2Q9UNF0 486 aaPredicted RBP1.67□□□□□ -2.14
CCDC38-206ENST00000548771 N6AMT1Q9Y5N5 214 aa1.67□□□□□ -2.14
CCDC38-206ENST00000548771 F11RQ9Y624 299 aaKnown RBP1.67□□□□□ -2.14
CCDC38-206ENST00000548771 LTBP4Q8N2S1 1624 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 IGLV3-22A0A075B6J6 115 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 TRAV40A0A0B4J280 105 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 H0YCG3 227 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 ZNF208O43345 1280 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 CAPN1P07384 714 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 SMIM10L1P0DMW3 83 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 PGAM1P18669 254 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 NPY1RP25929 384 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 OPRD1P41143 372 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 SSR1P43307 286 aaKnown RBP1.66□□□□□ -2.14
CCDC38-206ENST00000548771 CYB561P49447 251 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 NCBP2P52298 156 aaKnown RBP eCLIP1.66□□□□□ -2.14
CCDC38-206ENST00000548771 SLC7A9P82251 487 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 PRPSAP1Q14558 356 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 PMF1Q6P1K2 205 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 TRIM40Q6P9F5 258 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 BRD3OSQ6XYD6 125 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 LINC00173Q6ZV60 143 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 NEGR1Q7Z3B1 354 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 PIANPQ8IYJ0 282 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 PGAM4Q8N0Y7 254 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 MREGQ8N565 214 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 C10orf35Q96D05 121 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 MED8Q96G25 268 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 COQ2Q96H96 371 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 SMIM10Q96HG1 83 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 HSFY1Q96LI6 401 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 MS4A4EQ96PG1 132 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 TSSK3Q96PN8 268 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 SORT1Q99523 831 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 PPA2Q9H2U2 334 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 AZI2Q9H6S1 392 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 UGT1A7Q9HAW7 530 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 UGT1A10Q9HAW8 530 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 UGT1A8Q9HAW9 530 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 ZNF229Q9UJW7 825 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 MYO16Q9Y6X6 1858 aa1.66□□□□□ -2.14
CCDC38-206ENST00000548771 MSH6P52701 1360 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 TRAV26-1A0A087WT03 109 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 IGHV3-66A0A0C4DH42 116 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 PCP4L1A6NKN8 68 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 NDC80O14777 642 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 KMOO15229 486 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 MTX2O75431 263 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 UPK3AO75631 287 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 ERLIN2O94905 339 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 TLX1NBP0CAT3 122 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 PRPS2P11908 318 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 OMGP23515 440 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 ATP5C1P36542 298 aaKnown RBP1.65□□□□□ -2.15
CCDC38-206ENST00000548771 HSD17B2P37059 387 aa1.65□□□□□ -2.15
CCDC38-206ENST00000548771 MAGEA8P43361 318 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms