RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 VANGL1Q8TAA9 524 aaPredicted RBP14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 ADAMTS16Q8TE57 1224 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 TMEM54Q969K7 222 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 MAGEB18Q96M61 343 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 PCDHAC1Q9H158 963 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 TPK1Q9H3S4 243 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 CMAHPQ9Y471 501 aa14.99□□□□□ -0.01
CHMP1A-205ENST00000548650 SH3PXD2BA1X283 911 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 LILRA1O75019 489 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 UBL3O95164 117 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 RAB36O95755 333 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 ADRA2AP08913 450 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 IL2RGP31785 369 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 RIN1Q13671 783 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 FXNQ16595 210 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 SLC35D2Q76EJ3 337 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 PATL1Q86TB9 770 aaKnown RBP14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 ZNF584Q8IVC4 421 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 SLC30A8Q8IWU4 369 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 OR6X1Q8NH79 312 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 TSPEARQ8WU66 669 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 DENND2DQ9H6A0 471 aaPredicted RBP14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 NPHS2Q9NP85 383 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 TAS2R5Q9NYW4 299 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 GLTPQ9NZD2 209 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 SLC7A7Q9UM01 511 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 TRIM33Q9UPN9 1127 aa14.98□□□□□ -0.01
CHMP1A-205ENST00000548650 TRAPPC13A5PLN9 417 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 HMGB1P1B2RPK0 211 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 M0R233 179 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 KPNA4O00629 521 aaPredicted RBP14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 EDF1O60869 148 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 CH25HO95992 272 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 TGFAP01135 160 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 GLRXP35754 106 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 EVX1P49640 407 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 GZMMP51124 257 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 CHN2P52757 468 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 RAB1AP62820 205 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 ZP4Q12836 540 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 MELKQ14680 651 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 TRMT5Q32P41 509 aaKnown RBP14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 LRRC17Q8N6Y2 441 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 OR10A6Q8NH74 314 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 FGFBP3Q8TAT2 258 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 UBASH3BQ8TF42 649 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 MPP4Q96JB8 637 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 SNX18Q96RF0 628 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 PRSS27Q9BQR3 290 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 SLC19A3Q9BZV2 496 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 NANSQ9NR45 359 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 ZNF229Q9UJW7 825 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 ANK2Q01484 3957 aa14.97□□□□□ -0.01
CHMP1A-205ENST00000548650 SYNGR3O43761 229 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 OR6A2O95222 327 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 ASAH2BP0C7U1 165 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 PATE4P0C8F1 98 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 PGA4P0DJD7 388 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 PGA3P0DJD8 388 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 HNF1AP20823 631 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 RAB39AQ14964 217 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 TRIP10Q15642 601 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 CR1LQ2VPA4 569 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 TTC33Q6PID6 262 aaPredicted RBP14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 PIWIL3Q7Z3Z3 882 aaKnown RBP14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 SKA3Q8IX90 412 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 HPS1Q92902 700 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 SYT3Q9BQG1 590 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 SIKE1Q9BRV8 207 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 TMEM38BQ9NVV0 291 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 MYEF2Q9P2K5 600 aaKnown RBP14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 FBXL3Q9UKT7 428 aa14.96□□□□□ -0.01
CHMP1A-205ENST00000548650 LYNX1G3V0Z9 82 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 FXYD1O00168 92 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 FBP2O00757 339 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 RNF13O43567 381 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 LYNX1P0DP58 116 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 APEX1P27695 318 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 ALDH3B1P43353 468 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 RPS23P62266 143 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 MAD2L1BPQ15013 274 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 VMACQ2NL98 169 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 INTS11Q5TA45 600 aaKnown RBP14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 LRFN4Q6PJG9 635 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 CCDC80Q76M96 950 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 NANOGNBQ7Z5D8 188 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 LRP11Q86VZ4 500 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 SLC22A24Q8N4F4 322 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 ZNF566Q969W8 418 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 SLC25A44Q96H78 314 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 MEPEQ9NQ76 525 aaPredicted RBP14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 REV1Q9UBZ9 1251 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 SLC7A8Q9UHI5 535 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 SPEF1Q9Y4P9 236 aa14.95□□□□□ -0.02
CHMP1A-205ENST00000548650 A0A0G2JND7 137 aa14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 SERPINA5P05154 406 aa14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 CDH15P55291 814 aa14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 SRSF2Q01130 221 aaKnown RBP14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 GALK2Q01415 458 aa14.94□□□□□ -0.02
CHMP1A-205ENST00000548650 RABL3Q5HYI8 236 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms