RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 FKBP14Q9NWM8 211 aa15.48■□□□□ 0.07
HDAC7-227ENST00000548080 COQ3Q9NZJ6 369 aa15.48■□□□□ 0.07
HDAC7-227ENST00000548080 H2AFY2Q9P0M6 372 aaPredicted RBP15.48■□□□□ 0.07
HDAC7-227ENST00000548080 ERVK-18Q9QC07 812 aa15.48■□□□□ 0.07
HDAC7-227ENST00000548080 TRAPPC4Q9Y296 219 aa15.48■□□□□ 0.07
HDAC7-227ENST00000548080 ADAM18Q9Y3Q7 739 aa15.48■□□□□ 0.07
HDAC7-227ENST00000548080 RPL36Q9Y3U8 105 aaKnown RBP15.48■□□□□ 0.07
HDAC7-227ENST00000548080 MBD3L4A6NDZ8 208 aaPredicted RBP15.47■□□□□ 0.07
HDAC7-227ENST00000548080 MBD3L3A6NE82 208 aaPredicted RBP15.47■□□□□ 0.07
HDAC7-227ENST00000548080 MBD3L5A6NJ08 208 aaPredicted RBP15.47■□□□□ 0.07
HDAC7-227ENST00000548080 SLC22A20A6NK97 555 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 GJE1A6NN92 205 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 C11orf98E9PRG8 122 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 RNF13O43567 381 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 RGS10O43665 173 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 TXNDC12O95881 172 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 HTR1AP08908 422 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 HIST1H1CP16403 213 aaKnown RBP15.47■□□□□ 0.07
HDAC7-227ENST00000548080 ZNF3P17036 446 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 KLK2P20151 261 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 COL8A1P27658 744 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 RPS3AP61247 264 aaKnown RBP15.47■□□□□ 0.07
HDAC7-227ENST00000548080 PIGFQ07326 219 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 ZP4Q12836 540 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 FOXF2Q12947 444 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 ITGADQ13349 1161 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 RIPPLY2Q5TAB7 128 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 TMPPEQ6ZT21 453 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 AHSA2Q719I0 299 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 OR52E2Q8NGJ4 325 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 MBD3L2Q8NHZ7 208 aaPredicted RBP15.47■□□□□ 0.07
HDAC7-227ENST00000548080 RFKQ969G6 155 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 INTS12Q96CB8 462 aaKnown RBP15.47■□□□□ 0.07
HDAC7-227ENST00000548080 PSMG3-AS1Q96PY0 264 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 RHNO1Q9BSD3 238 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 COPS4Q9BT78 406 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 CNOT2Q9NZN8 540 aaKnown RBP15.47■□□□□ 0.07
HDAC7-227ENST00000548080 SNX5Q9Y5X3 404 aa15.47■□□□□ 0.07
HDAC7-227ENST00000548080 IGHV3-15A0A0B4J1V0 119 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 PRR23D1E9PI22 279 aaPredicted RBP15.46■□□□□ 0.07
HDAC7-227ENST00000548080 M0R3G1 203 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 SULT2B1O00204 365 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 AQP8O94778 261 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 IL2RAP01589 272 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 TFAP2AP05549 437 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 PRR23D2P0DMB1 279 aaPredicted RBP15.46■□□□□ 0.07
HDAC7-227ENST00000548080 AHCYP23526 432 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 GRNP28799 593 aaKnown RBP15.46■□□□□ 0.07
HDAC7-227ENST00000548080 CEACAM8P31997 349 aaPredicted RBP15.46■□□□□ 0.07
HDAC7-227ENST00000548080 SLC15A1P46059 708 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 RPL5P46777 297 aaKnown RBP15.46■□□□□ 0.07
HDAC7-227ENST00000548080 NR1H2P55055 460 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 CARD18P57730 90 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 SLC35A1P78382 337 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 ZNF91Q05481 1191 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.46■□□□□ 0.07
HDAC7-227ENST00000548080 SF3B4Q15427 424 aaKnown RBP eCLIP15.46■□□□□ 0.074e-9■■■■□ 21.6
HDAC7-227ENST00000548080 NXNL2Q5VZ03 156 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 GPR139Q6DWJ6 353 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 PLBD1Q6P4A8 553 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 ESPNLQ6ZVH7 1005 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 FAM122BQ7Z309 247 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 SPARTQ8N0X7 666 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 ADPRHL1Q8NDY3 354 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 OR4K13Q8NH42 304 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 CA5BP1Q8WTZ4 195 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 ROBO4Q8WZ75 1007 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 OTULINQ96BN8 352 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 CCDC90BQ9GZT6 254 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 GRHPRQ9UBQ7 328 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.46■□□□□ 0.075e-6■■■■□ 20.5
HDAC7-227ENST00000548080 CLEC4AQ9UMR7 237 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 B3GALT5Q9Y2C3 310 aa15.46■□□□□ 0.07
HDAC7-227ENST00000548080 FAM183AA6NL82 134 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 MS4A18H0YCH9 400 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 AKR7A3O95154 331 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 CLDN14O95500 239 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 PMS2P2O95744 297 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 CDK1P06493 297 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 TMIGD3P0DMS9 266 aaPredicted RBP15.46■□□□□ 0.06
HDAC7-227ENST00000548080 DBTP11182 482 aaKnown RBP15.46■□□□□ 0.06
HDAC7-227ENST00000548080 PIPP12273 146 aaPredicted RBP15.46■□□□□ 0.06
HDAC7-227ENST00000548080 BMP5P22003 454 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 PAICSP22234 425 aaKnown RBP15.46■□□□□ 0.06
HDAC7-227ENST00000548080 CHRNB4P30926 498 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 SDHAP31040 664 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 TIMP3P35625 211 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 DIO1P49895 249 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 SIRPAP78324 504 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 PUDPQ08623 228 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 CRMP1Q14194 572 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 MS4A18Q3C1V0 323 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 XKRXQ6PP77 449 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 PRSS48Q7RTY5 328 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 GID4Q8IVV7 300 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 STX19Q8N4C7 294 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 SLC37A3Q8NCC5 494 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 WNT2BQ93097 391 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 RASD2Q96D21 266 aa15.46■□□□□ 0.06
HDAC7-227ENST00000548080 Q96M85 177 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms