RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 ST6GALNAC2Q9UJ37 374 aa11.49□□□□□ -0.57
SCAF11-209ENST00000547018 FBXL2Q9UKC9 423 aa11.49□□□□□ -0.57
SCAF11-209ENST00000547018 MED13Q9UHV7 2174 aa11.49□□□□□ -0.57
SCAF11-209ENST00000547018 SPTA1P02549 2419 aa11.49□□□□□ -0.57
SCAF11-209ENST00000547018 TRAV36DV7A0A075B6V5 113 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 IGHV3-15A0A0B4J1V0 119 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 NPIPA5E9PKD4 350 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 TSC22D2O75157 780 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 P2RX1P51575 399 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 CCR6P51684 374 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 GPR85P60893 370 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 LINC01590Q5TEZ4 76 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 HBMQ6B0K9 141 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 WDR74Q6RFH5 385 aaPredicted RBP11.48□□□□□ -0.57
SCAF11-209ENST00000547018 GNRHR2Q96P88 292 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 INTS14Q96SY0 518 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 DUSP23Q9BVJ7 150 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 PRO3102Q9H379 93 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 KLHL13Q9P2N7 655 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 ADAM30Q9UKF2 790 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 NPIPA1Q9UND3 350 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 HIF3AQ9Y2N7 669 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 MYO7BQ6PIF6 2116 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 ICE1Q9Y2F5 2266 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 COL4A2P08572 1712 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 B4DXG7 233 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 KLK3P07288 261 aaPredicted RBP11.48□□□□□ -0.57
SCAF11-209ENST00000547018 ASAH2BP0C7U1 165 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 SRMP19623 302 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 ACTA2P62736 377 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 ACTG2P63267 376 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 FAM69AQ5T7M9 428 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 FNDC7Q5VTL7 733 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 AGAP6Q5VW22 663 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 SLITRK4Q8IW52 837 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 MS4A15Q8N5U1 240 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 TMEM156Q8N614 296 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 FRMD6Q96NE9 622 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 AGAP4Q96P64 663 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 NDEL1Q9GZM8 345 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 ZMAT3Q9HA38 289 aaKnown RBP11.48□□□□□ -0.57
SCAF11-209ENST00000547018 PILRBQ9UKJ0 227 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 RABL2BQ9UNT1 228 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 MGAQ8IWI9 3026 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 DCDC2BA2VCK2 349 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 BLACEA4D250 179 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 MT-ND4P03905 459 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 PRKXP51817 358 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 POU4F2Q12837 409 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 TATDN3Q17R31 274 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 RSPO4Q2I0M5 234 aaPredicted RBP11.48□□□□□ -0.57
SCAF11-209ENST00000547018 BCL2L15Q5TBC7 163 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 CPEB2Q7Z5Q1 589 aaKnown RBP11.48□□□□□ -0.57
SCAF11-209ENST00000547018 GDPD1Q8N9F7 314 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 MINDY2Q8NBR6 621 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 UXS1Q8NBZ7 420 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 HOXB13Q92826 284 aaPredicted RBP11.48□□□□□ -0.57
SCAF11-209ENST00000547018 PMM1Q92871 262 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 ZNF221Q9UK13 617 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 FBXL3Q9UKT7 428 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 POLHQ9Y253 713 aa11.48□□□□□ -0.57
SCAF11-209ENST00000547018 MN1Q10571 1320 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 ANXA2P2A6NMY6 339 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 SMAD9O15198 467 aaKnown RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 PIN1P1O15428 100 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 ARL6IP5O75915 188 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 ANXA2P07355 339 aaKnown RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 MTNR1BP49286 362 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 POLR2HP52434 150 aaKnown RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 RAB15P59190 212 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 TAS2R43P59537 309 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 SNRPD2P62316 118 aaKnown RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 TMEM176BQ3YBM2 270 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 YOD1Q5VVQ6 348 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 NUP54Q7Z3B4 507 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 LUZP2Q86TE4 346 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 ZBTB8BQ8NAP8 495 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 POMGNT2Q8NAT1 580 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 PLPP7Q8NBV4 271 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 OR4K17Q8NGC6 315 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 NUDT15Q9NV35 164 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 FRRS1LQ9P0K9 344 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 A0A1W2PPL8 197 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 TRABD2BA6NFA1 517 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 ARPC3O15145 178 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 CDAP32320 146 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 RFC3P40938 356 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 ZNF41P51814 821 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 PNLIPRP2P54317 469 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 EIF2B1Q14232 305 aaKnown RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 TMEM225Q6GV28 225 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 FAM122BQ7Z309 247 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 WDFY1Q8IWB7 410 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 ARRDC1-AS1Q9H2J1 176 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 LIN7BQ9HAP6 207 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 UGT2A1Q9Y4X1 527 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 A8MVM7 634 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 TRIM3O75382 744 aaPredicted RBP11.47□□□□□ -0.57
SCAF11-209ENST00000547018 EPXP11678 715 aa11.47□□□□□ -0.57
SCAF11-209ENST00000547018 SLC6A8P48029 635 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms