RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 MRPL2Q5T653 305 aaKnown RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 Q6ZRG5 221 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 TECPR1Q7Z6L1 1165 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 HMGN2P46Q86SG4 172 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 OR5T1Q8NG75 326 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 CHAC2Q8WUX2 184 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 EMG1Q92979 244 aaKnown RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 VPS25Q9BRG1 176 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 METTL9Q9H1A3 318 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 DLL4Q9NR61 685 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF586Q9NXT0 402 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 TMEM218A2RU14 115 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 SEC14L6B5MCN3 397 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 M0QZK8 103 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 GGCTO75223 188 aaKnown RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 NDUFB6O95139 128 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 GPR75O95800 540 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 LIPCP11150 499 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 ATP1B3P54709 279 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 GDF6Q6KF10 455 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 BRICD5Q6PL45 260 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 KIAA0907Q7Z7F0 614 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-212ENST00000546744 S100A7AQ86SG5 101 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 MS4A8Q9BY19 250 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 P2RY12Q9H244 342 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF160Q9HCG1 818 aa11.82□□□□□ -0.52
PTCH1-212ENST00000546744 NPIPA7E9PJI5 369 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 GYPBP06028 91 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 OR4E1P0C645 316 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 METTL15P1P0C7V9 234 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 NPIPA8P0DM63 369 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 FOLR1P15328 257 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 RPA2P15927 270 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 CBR1P16152 277 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 BCKDHBP21953 392 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 SLC6A1P30531 599 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 RAD52P43351 418 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 EMC4Q5J8M3 183 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 C12orf73Q69YU5 71 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF852Q6ZMS4 543 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 NLGN4XQ8N0W4 816 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 LOC102725191A0A1B0GVB3 256 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 MCCD1P59942 119 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-212ENST00000546744 MRPS34P82930 218 aaKnown RBP11.81□□□□□ -0.52
PTCH1-212ENST00000546744 DLX2Q07687 328 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-212ENST00000546744 CLINT1Q14677 625 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 C17orf99Q6UX52 265 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 B3GLCTQ6Y288 498 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 GDF7Q7Z4P5 450 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 LYG2Q86SG7 212 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 TMEM156Q8N614 296 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF610Q8N9Z0 462 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 ENKD1Q9H0I2 346 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 CHST8Q9H2A9 424 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF860A6NHJ4 632 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 DDAH2O95865 285 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 ZNF728P0DKX0 622 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 CPMP14384 443 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 HOXD9P28356 352 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-212ENST00000546744 DOC2BQ14184 412 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 HLXQ14774 488 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-212ENST00000546744 CDK5R1Q15078 307 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 FCRL6Q6DN72 434 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 OR5M10Q6IEU7 315 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 TMEM81Q6P7N7 255 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 RHOFQ9HBH0 211 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 PDE7BQ9NP56 450 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 SLC16A7O60669 478 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 ACY1Q03154 408 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 SLC22A6Q4U2R8 563 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 IGSF11Q5DX21 431 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 C11orf87Q6NUJ2 197 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 CLEC9AQ6UXN8 241 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 OTOP2Q7RTS6 562 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 SSX7Q7RTT5 188 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 ABHD12BQ7Z5M8 362 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-212ENST00000546744 GATSQ8NAP1 163 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 OR1S2Q8NGQ3 325 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 OR13C9Q8NGT0 318 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 C2orf50Q96LR7 162 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 CSF3RQ99062 836 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 TIMM29Q9BSF4 260 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 C1orf198Q9H425 327 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 C5AR2Q9P296 337 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 GAB2Q9UQC2 676 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 LOXHD1Q8IVV2 1947 aa11.81□□□□□ -0.52
PTCH1-212ENST00000546744 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-212ENST00000546744 TMX2-CTNND1H3BSU7 103 aa11.8□□□□□ -0.52
PTCH1-212ENST00000546744 STATHP02808 62 aa11.8□□□□□ -0.52
PTCH1-212ENST00000546744 DUSP1P28562 367 aa11.8□□□□□ -0.52
PTCH1-212ENST00000546744 TRHRP34981 398 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-212ENST00000546744 CLDN12P56749 244 aa11.8□□□□□ -0.52
PTCH1-212ENST00000546744 CATR1Q13166 79 aa11.8□□□□□ -0.52
PTCH1-212ENST00000546744 GAB1Q13480 694 aa11.8□□□□□ -0.52
PTCH1-212ENST00000546744 ACOT6Q3I5F7 207 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-212ENST00000546744 TMEM207Q6UWW9 146 aa11.8□□□□□ -0.52
PTCH1-212ENST00000546744 DBX2Q6ZNG2 339 aa11.8□□□□□ -0.52
PTCH1-212ENST00000546744 COX15Q7KZN9 410 aa11.8□□□□□ -0.52
PTCH1-212ENST00000546744 BVESQ8NE79 360 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms