RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 SLC7A7Q9UM01 511 aa12.34□□□□□ -0.43
TROAP-203ENST00000546735 CMAHPQ9Y471 501 aa12.34□□□□□ -0.43
TROAP-203ENST00000546735 FMO6PO60774 539 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 LILRA1O75019 489 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 RAB36O95755 333 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 C8BP07358 591 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 ZNF35P13682 527 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 SRD5A1P18405 259 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 TCN1P20061 433 aaPredicted RBP12.33□□□□□ -0.44
TROAP-203ENST00000546735 SEC24CP53992 1094 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 RAB39AQ14964 217 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 TRIP10Q15642 601 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 KRTAP24-1Q3LI83 254 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 TTC33Q6PID6 262 aaPredicted RBP12.33□□□□□ -0.44
TROAP-203ENST00000546735 SLC35D2Q76EJ3 337 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 LRP11Q86VZ4 500 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 SKA3Q8IX90 412 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 ZNF540Q8NDQ6 660 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 UBASH3BQ8TF42 649 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 TMEM54Q969K7 222 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 MRPL24Q96A35 216 aaKnown RBP12.33□□□□□ -0.44
TROAP-203ENST00000546735 MYEF2Q9P2K5 600 aaKnown RBP12.33□□□□□ -0.44
TROAP-203ENST00000546735 FZR1Q9UM11 496 aa12.33□□□□□ -0.44
TROAP-203ENST00000546735 FBN3Q75N90 2809 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 A0A0G2JND7 137 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 RNF13O43567 381 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 EDF1O60869 148 aaKnown RBP12.32□□□□□ -0.44
TROAP-203ENST00000546735 ERCC1P07992 297 aaPredicted RBP12.32□□□□□ -0.44
TROAP-203ENST00000546735 TNFRSF1BP20333 461 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 GIFP27352 417 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 PCGF2P35227 344 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 ALDH3B1P43353 468 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 GZMMP51124 257 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 CRYBA2P53672 197 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 MAD2L1BPQ15013 274 aaPredicted RBP12.32□□□□□ -0.44
TROAP-203ENST00000546735 TRMT5Q32P41 509 aaKnown RBP12.32□□□□□ -0.44
TROAP-203ENST00000546735 GKAP1Q5VSY0 366 aaPredicted RBP12.32□□□□□ -0.44
TROAP-203ENST00000546735 PATL1Q86TB9 770 aaKnown RBP12.32□□□□□ -0.44
TROAP-203ENST00000546735 ZNF584Q8IVC4 421 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 ZNF786Q8N393 782 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 OR6X1Q8NH79 312 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 SLC26A7Q8TE54 656 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 SNX18Q96RF0 628 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 GLTPQ9NZD2 209 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 FBXO9Q9UK97 447 aaPredicted RBP12.32□□□□□ -0.44
TROAP-203ENST00000546735 TRIM33Q9UPN9 1127 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 MALRD1Q5VYJ5 2156 aa12.32□□□□□ -0.44
TROAP-203ENST00000546735 TRAPPC13A5PLN9 417 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 HMGB1P1B2RPK0 211 aaPredicted RBP12.31□□□□□ -0.44
TROAP-203ENST00000546735 FBP2O00757 339 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 SHOX2O60902 331 aaPredicted RBP12.31□□□□□ -0.44
TROAP-203ENST00000546735 UBL3O95164 117 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 TACSTD2P09758 323 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 UMPSP11172 480 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 APEX1P27695 318 aaKnown RBP12.31□□□□□ -0.44
TROAP-203ENST00000546735 GLRXP35754 106 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 ZP4Q12836 540 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 SF3A3Q12874 501 aaKnown RBP eCLIP12.31□□□□□ -0.442e-7■■■■■ 49.4
TROAP-203ENST00000546735 VMACQ2NL98 169 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 CR1LQ2VPA4 569 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 RABL3Q5HYI8 236 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 LRFN4Q6PJG9 635 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 CARM1Q86X55 608 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 SNX32Q86XE0 403 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 SLC22A24Q8N4F4 322 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 STON2Q8WXE9 905 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 ZNF566Q969W8 418 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 PRSS27Q9BQR3 290 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 MEPEQ9NQ76 525 aaPredicted RBP12.31□□□□□ -0.44
TROAP-203ENST00000546735 NANSQ9NR45 359 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 REV1Q9UBZ9 1251 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 SPEF1Q9Y4P9 236 aa12.31□□□□□ -0.44
TROAP-203ENST00000546735 M0R233 179 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 DHHO43323 396 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 SYNGR3O43761 229 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 HPXP02790 462 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 ASAH2BP0C7U1 165 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 PGA4P0DJD7 388 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 PGA3P0DJD8 388 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 CCL2P13500 99 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 CHN2P52757 468 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 MYBPC1Q00872 1141 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 GALK2Q01415 458 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 RUNX1T1Q06455 604 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 RIN1Q13671 783 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 CCNIQ14094 377 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 FXNQ16595 210 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 ALKBH6Q3KRA9 238 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 ELFN2Q5R3F8 820 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 NANOGP8Q6NSW7 305 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 PIWIL3Q7Z3Z3 882 aaKnown RBP12.3□□□□□ -0.44
TROAP-203ENST00000546735 NANOGNBQ7Z5D8 188 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 NKAIN4Q8IVV8 208 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 PFN4Q8NHR9 129 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 ZNF347Q96SE7 839 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 ZNF426Q9BUY5 554 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 TMEM120AQ9BXJ8 343 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
TROAP-203ENST00000546735 NANOGQ9H9S0 305 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms