RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ZNF620Q6ZNG0 422 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 FAM122BQ7Z309 247 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 HS3ST5Q8IZT8 346 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 OR6N1Q8NGY5 312 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 ZNF519Q8TB69 540 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 LRTOMTQ8WZ04 291 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 GTPBP3Q969Y2 492 aaKnown RBP18■□□□□ 0.47
HMGA2-211ENST00000545998 ZNF837Q96EG3 531 aaPredicted RBP18■□□□□ 0.47
HMGA2-211ENST00000545998 FEVQ99581 238 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 USB1Q9BQ65 265 aaKnown RBP18■□□□□ 0.47
HMGA2-211ENST00000545998 MED18Q9BUE0 208 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 OR52D1Q9H346 318 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 CRLF2Q9HC73 371 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 NRIP3Q9NQ35 241 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 GLTPQ9NZD2 209 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 ADAM18Q9Y3Q7 739 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 APCP25054 2843 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 CIB4A0PJX0 185 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 TRMUO75648 421 aaKnown RBP18■□□□□ 0.47
HMGA2-211ENST00000545998 RAD51DO75771 328 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 EPXP11678 715 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 TGFBR3Q03167 851 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 GABRA6Q16445 453 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 HMBOX1Q6NT76 420 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 ZFP1Q6P2D0 407 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 SHQ1Q6PI26 577 aaKnown RBP18■□□□□ 0.47
HMGA2-211ENST00000545998 DPY19L2P2Q6ZN68 376 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 C1orf162Q8NEQ5 155 aaPredicted RBP18■□□□□ 0.47
HMGA2-211ENST00000545998 NOXO1Q8NFA2 376 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 NRBF2Q96F24 287 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 MUS81Q96NY9 551 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 NIPSNAP1Q9BPW8 284 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 B3GAT2Q9NPZ5 323 aa18■□□□□ 0.47
HMGA2-211ENST00000545998 STX18Q9P2W9 335 aaKnown RBP18■□□□□ 0.47
HMGA2-211ENST00000545998 LRBAP50851 2863 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 H3BNX3 289 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 THBDP07204 575 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 ACVR1BP36896 505 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 CLRN1P58418 232 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 CEACAM16Q2WEN9 425 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 FAM205BPQ63HN1 556 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 OR7E24Q6IFN5 339 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 CD300LDQ6UXZ3 194 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 RASSF6Q6ZTQ3 369 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 C10orf67Q8IYJ2 551 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 ARIH2OSQ8N7S6 290 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 HDAC2Q92769 488 aaKnown RBP17.99■□□□□ 0.47
HMGA2-211ENST00000545998 MARVELD3Q96A59 401 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 BOD1Q96IK1 185 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 SAMD8Q96LT4 415 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 BDH2Q9BUT1 245 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 ULBP2Q9BZM5 246 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 EGLN3Q9H6Z9 239 aa17.99■□□□□ 0.47
HMGA2-211ENST00000545998 MAGED1Q9Y5V3 778 aaPredicted RBP17.99■□□□□ 0.47
HMGA2-211ENST00000545998 ENTPD5O75356 428 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 GSTM3P21266 225 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 ARHGDIAP52565 204 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 SH3BGRP55822 239 aaPredicted RBP17.98■□□□□ 0.47
HMGA2-211ENST00000545998 LRFN4Q6PJG9 635 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 AMIGO2Q86SJ2 522 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 P2RY8Q86VZ1 359 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 ZNF295-AS1Q8N0V1 137 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 SYT14Q8NB59 555 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 OR1K1Q8NGR3 316 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 HSD17B8Q92506 261 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 Q96M85 177 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 KCNK17Q96T54 332 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 IL20Q9NYY1 176 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 GRHPRQ9UBQ7 328 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 CDH10Q9Y6N8 788 aa17.98■□□□□ 0.47
HMGA2-211ENST00000545998 A6NIZ1 184 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 OR5H1A6NKK0 313 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 ANKRD65E5RJM6 399 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 CDH2P19022 906 aaPredicted RBP17.97■□□□□ 0.47
HMGA2-211ENST00000545998 PRKACGP22612 351 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 SLC6A6P31641 620 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 RAP1BP61224 184 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 RAP1AP62834 184 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 COX10Q12887 443 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 TAB1Q15750 504 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 STK11Q15831 433 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 TIMM23BQ5SRD1 257 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 GPR139Q6DWJ6 353 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 RPL13AP3Q6NVV1 102 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 CLDN22Q8N7P3 220 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 OR5K1Q8NHB7 308 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 ZC3HAV1LQ96H79 300 aaKnown RBP17.97■□□□□ 0.47
HMGA2-211ENST00000545998 ZNF570Q96NI8 536 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 ALG12Q9BV10 488 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 IER3IP1Q9Y5U9 82 aa17.97■□□□□ 0.47
HMGA2-211ENST00000545998 ZNF99A8MXY4 864 aaPredicted RBP17.96■□□□□ 0.47
HMGA2-211ENST00000545998 TXNDC12O95881 172 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 TP53P04637 393 aaPredicted RBP17.96■□□□□ 0.47
HMGA2-211ENST00000545998 QDPRP09417 244 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 APEHP13798 732 aaKnown RBP17.96■□□□□ 0.47
HMGA2-211ENST00000545998 SDHAP31040 664 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 RPS6KA3P51812 740 aa17.96■□□□□ 0.47
HMGA2-211ENST00000545998 ZNF133P52736 654 aaPredicted RBP17.96■□□□□ 0.47
HMGA2-211ENST00000545998 ARF1P84077 181 aaKnown RBP17.96■□□□□ 0.47
HMGA2-211ENST00000545998 DAZAP2Q15038 168 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms