RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 SERINC4A6NH21 518 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 RNASET2O00584 256 aaKnown RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 ADAP00813 363 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 TNFSF8P32971 234 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 MFAP5Q13361 173 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF169Q14929 603 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 PLEKHN1Q494U1 663 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 Q5BKY6 102 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 RNASE10Q5GAN6 216 aaKnown RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 GUSBP11Q6P575 273 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 BLOC1S3Q6QNY0 202 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 VTCN1Q7Z7D3 282 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 OR51T1Q8NGJ9 327 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 CCDC32Q9BV29 185 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 ACPTQ9BZG2 426 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 NUDT15Q9NV35 164 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 COL6A6A6NMZ7 2263 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 GLCEO94923 617 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 IFNA5P01569 189 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 F13BP05160 661 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 DNASE1P24855 282 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 MAP2K3P46734 347 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 YBX1P67809 324 aaKnown RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 FLI1Q01543 452 aaPredicted RBP7.91□□□□□ -1.14
CLIP1-218ENST00000545889 TBC1D28Q2M2D7 210 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 TMEM65Q6PI78 240 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SLC16A12Q6ZSM3 486 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 NLRC3Q7RTR2 1065 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 VASH2Q86V25 355 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 CPOQ8IVL8 374 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF547Q8IVP9 402 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SAMD12Q8N8I0 201 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SDR9C7Q8NEX9 313 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 OR5AK2Q8NH90 309 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 TTC9Q92623 222 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 MVB12AQ96EY5 273 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 FEVQ99581 238 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 SSX3Q99909 188 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 RHBDD3Q9Y3P4 386 aa7.91□□□□□ -1.14
CLIP1-218ENST00000545889 TMED7-TICAM2A0A0A6YYA0 188 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 TMEM269A0A1B0GVZ9 245 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF732B4DXR9 585 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 OR7C1O76099 320 aaPredicted RBP7.9□□□□□ -1.14
CLIP1-218ENST00000545889 FGF4P08620 206 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 BCKDHBP21953 392 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 IL3RAP26951 378 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 GTDC1Q4AE62 458 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 VASNQ6EMK4 673 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 NUDT8Q8WV74 236 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 FOXN4Q96NZ1 517 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 LMF1Q96S06 567 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 TEX101Q9BY14 249 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 P4HTMQ9NXG6 502 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 TMED7Q9Y3B3 224 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 IGHV1OR15-9A0A0B4J2B8 117 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 SERTM1A2A2V5 107 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 MITFO75030 526 aaPredicted RBP7.9□□□□□ -1.14
CLIP1-218ENST00000545889 B3GALT4O96024 378 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 TNFRSF1BP20333 461 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 STOMP27105 288 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 HTR1EP28566 365 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 ETV5P41161 510 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 MTNR1AP48039 350 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 FXYD4P59646 89 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 PFN3P60673 137 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 CLN3Q13286 438 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 CDK5R2Q13319 367 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 MICAQ29983 383 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 SLC16A13Q7RTY0 426 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 NAXDQ8IW45 347 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 KLHDC8BQ8IXV7 354 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 FSCN3Q9NQT6 498 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 GPR52Q9Y2T5 361 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 ZNF337Q9Y3M9 751 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 ALG5Q9Y673 324 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 FRMPD3Q5JV73 1810 aa7.9□□□□□ -1.14
CLIP1-218ENST00000545889 NXPH2O95156 264 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 SLC34A2O95436 690 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 EPHA8P29322 1005 aaPredicted RBP7.9□□□□□ -1.15
CLIP1-218ENST00000545889 SNCAP37840 140 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 CSNK1G2P78368 415 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 AIMP2Q13155 320 aaKnown RBP7.9□□□□□ -1.15
CLIP1-218ENST00000545889 RAB35Q15286 201 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 SLC22A6Q4U2R8 563 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 MRPL2Q5T653 305 aaKnown RBP7.9□□□□□ -1.15
CLIP1-218ENST00000545889 ZBTB37Q5TC79 503 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 TMEM211Q6ICI0 200 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 MTFR2Q6P444 385 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 S100A7AQ86SG5 101 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 C1orf87Q8N0U7 546 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 DEFB108BQ8NET1 73 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 SLC39A7Q92504 469 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 GUCD1Q96NT3 240 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 HHLA2Q9UM44 414 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 TRBV23-1A0A0A0MS06 115 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 B4DXG7 233 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 PRICKLE3O43900 615 aaPredicted RBP7.9□□□□□ -1.15
CLIP1-218ENST00000545889 EEDO75530 441 aaKnown RBP7.9□□□□□ -1.15
CLIP1-218ENST00000545889 NPPBP16860 134 aa7.9□□□□□ -1.15
CLIP1-218ENST00000545889 GABARAPL2P60520 117 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms