RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 SUB1P53999 127 aaKnown RBP eCLIP3.31□□□□□ -1.88
COPA-206ENST00000545266 UGT2B15P54855 530 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 PFN3P60673 137 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 AQP6Q13520 282 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 GGTLC2Q14390 218 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 LRRC31Q6UY01 552 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 PEX26Q7Z412 305 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 OR4F6Q8NGB9 312 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 TAAR1Q96RJ0 339 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 SH3GL3Q99963 347 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 ROPN1BQ9BZX4 212 aaPredicted RBP3.31□□□□□ -1.88
COPA-206ENST00000545266 LINC00597Q9H2U6 94 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 ZNF223Q9UK11 482 aaPredicted RBP3.31□□□□□ -1.88
COPA-206ENST00000545266 PSG11Q9UQ72 335 aa3.31□□□□□ -1.88
COPA-206ENST00000545266 COL4A4P53420 1690 aaPredicted RBP3.3□□□□□ -1.88
COPA-206ENST00000545266 MSH6P52701 1360 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 CEMIPQ8WUJ3 1361 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 XKRYO14609 159 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 MAGEB4O15481 346 aaPredicted RBP3.3□□□□□ -1.88
COPA-206ENST00000545266 TMEM50AO95807 157 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 ZNF30P17039 623 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 KITLGP21583 273 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 CCR8P51685 355 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 MNAT1P51948 309 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 LINC00315P59091 139 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 IMMTQ16891 758 aaKnown RBP3.3□□□□□ -1.88
COPA-206ENST00000545266 KDM7AQ6ZMT4 941 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 RUFY3Q7L099 469 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 LHFPL3Q86UP9 236 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 OR1L6Q8NGR2 347 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 N4BP2L2Q92802 583 aaPredicted RBP3.3□□□□□ -1.88
COPA-206ENST00000545266 EXOSC8Q96B26 276 aaKnown RBP3.3□□□□□ -1.88
COPA-206ENST00000545266 CEP170P1Q96L14 293 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 IFT74Q96LB3 600 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 WFIKKN1Q96NZ8 548 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 VCXQ9H320 206 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 PATZ1Q9HBE1 687 aaKnown RBP3.3□□□□□ -1.88
COPA-206ENST00000545266 COX16Q9P0S2 106 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 RABL2BQ9UNT1 228 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 ASB3Q9Y575 518 aa3.3□□□□□ -1.88
COPA-206ENST00000545266 ZNFX1Q9P2E3 1918 aaKnown RBP3.3□□□□□ -1.88
COPA-206ENST00000545266 IGKV2D-24A0A075B6R9 120 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 PRSS37A4D1T9 235 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 PLEKP08567 350 aaPredicted RBP3.29□□□□□ -1.88
COPA-206ENST00000545266 IGFBP3P17936 291 aaPredicted RBP3.29□□□□□ -1.88
COPA-206ENST00000545266 RPS21P63220 83 aaKnown RBP3.29□□□□□ -1.88
COPA-206ENST00000545266 SMARCB1Q12824 385 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 C16orf72Q14CZ0 275 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 TTLL9Q3SXZ7 439 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 CEP55Q53EZ4 464 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 PHYHD1Q5SRE7 291 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 CNIH2Q6PI25 160 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 H1FOOQ8IZA3 346 aaPredicted RBP3.29□□□□□ -1.88
COPA-206ENST00000545266 PUSL1Q8N0Z8 303 aaKnown RBP3.29□□□□□ -1.88
COPA-206ENST00000545266 C15orf56Q8N910 161 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 CCDC54Q8NEL0 328 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 OR2L3Q8NG85 312 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 STARD4Q96DR4 205 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 TCEANC2Q96MN5 208 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 TSSK3Q96PN8 268 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 IFI27L2Q9H2X8 130 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 MYO10Q9HD67 2058 aa3.29□□□□□ -1.88
COPA-206ENST00000545266 TRAV39A0A0B4J263 110 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 C11orf94C9JXX5 98 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 CD5LO43866 347 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 AIREO43918 545 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 C6orf47O95873 294 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 RETP07949 1114 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 TPM2P07951 284 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 KDELC1Q6UW63 502 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 LRRC74BQ6ZQY2 392 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 LINC00173Q6ZV60 143 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 STARD8Q92502 1023 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 SGK3Q96BR1 496 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 TUBGCP3Q96CW5 907 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 HSFY1Q96LI6 401 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 OSBPL10Q9BXB5 764 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 TMEM59Q9BXS4 323 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 SLCO1B3Q9NPD5 702 aa3.28□□□□□ -1.88
COPA-206ENST00000545266 NFASCO94856 1347 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 LRCOL1A6NCL2 159 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 BTBD17A6NE02 478 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 H0YHG0 523 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 EIF3GO75821 320 aaKnown RBP eCLIP3.27□□□□□ -1.89
COPA-206ENST00000545266 CT62P0C5K7 136 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 SLC2A5P22732 501 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 ZNF92Q03936 586 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 BST1Q10588 318 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 BST2Q10589 180 aaKnown RBP3.27□□□□□ -1.89
COPA-206ENST00000545266 EIF4EBP1Q13541 118 aaPredicted RBP3.27□□□□□ -1.89
COPA-206ENST00000545266 DEFB116Q30KQ4 102 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 STPG2Q8N412 459 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 SDR9C7Q8NEX9 313 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 OR13C2Q8NGS9 318 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 ZFP90Q8TF47 636 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 TMEM54Q969K7 222 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 DNAJC19Q96DA6 116 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 FOPNLQ96NB1 174 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 RARRES2Q99969 163 aa3.27□□□□□ -1.89
COPA-206ENST00000545266 ETNK2Q9NVF9 386 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms