RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 TNFRSF1BP20333 461 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 PTNP21246 168 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 PTAFRP25105 342 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 RBM34P42696 430 aaKnown RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 GSK3BP49841 420 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 MNAT1P51948 309 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 FOXG1P55316 489 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 SH3BGRP55822 239 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 UBE2NP61088 152 aaKnown RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 POU3F1Q03052 451 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 BSPH1Q075Z2 132 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ZP4Q12836 540 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 PIN1Q13526 163 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF74Q16587 644 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 IFI44LQ53G44 452 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 GKAP1Q5VSY0 366 aaPredicted RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 GLYATQ6IB77 296 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ADAM5Q6NVV9 412 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 WDR88Q6ZMY6 472 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 CBLL1Q75N03 491 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 PXKQ7Z7A4 578 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF611Q8N823 705 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 TMEM171Q8WVE6 324 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 TMEM239Q8WW34 195 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 GEMIN6Q8WXD5 167 aaKnown RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 AKAP1Q92667 903 aaKnown RBP eCLIP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 FAM162AQ96A26 154 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 BOD1Q96IK1 185 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 LRR1Q96L50 414 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 MOGAT1Q96PD6 335 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 JMJD8Q96S16 334 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 CCT8L2Q96SF2 557 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 KCNJ15Q99712 375 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 PRSS27Q9BQR3 290 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF426Q9BUY5 554 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 MOV10Q9HCE1 1003 aaKnown RBP6.46□□□□□ -1.38
CPSF7-224ENST00000544990 OBP2BQ9NPH6 170 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 SLC17A5Q9NRA2 495 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 NDE1Q9NXR1 346 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 B3GAT1Q9P2W7 334 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ABCD2Q9UBJ2 740 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 TAGLN3Q9UI15 199 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF229Q9UJW7 825 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 RPS6KA6Q9UK32 745 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 MED31Q9Y3C7 131 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 SLC25A15Q9Y619 301 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 POLQO75417 2590 aa6.46□□□□□ -1.38
CPSF7-224ENST00000544990 A0A1W2PR80 420 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 KIAA1324LA8MWY0 1029 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-224ENST00000544990 LRRN3E7EW58 273 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 BLOC1S5-TXNDC5H3BN57 136 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 M0R1B8 84 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 ABCD4O14678 606 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 RNF13O43567 381 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 TRAF3IP2O43734 574 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-224ENST00000544990 UPK3AO75631 287 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 SERPINI2O75830 405 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 LYPD3O95274 346 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 HPRP00739 348 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 SERPINA1P01009 418 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 IGF2P01344 180 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 FUT1P19526 365 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 CD40P25942 277 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF83P51522 516 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 NKX6-1P78426 367 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-224ENST00000544990 MXRA7P84157 204 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 ROR2Q01974 943 aaKnown RBP6.45□□□□□ -1.38
CPSF7-224ENST00000544990 FOXD4Q12950 439 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-224ENST00000544990 TRAM2Q15035 370 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 TBRG1Q3YBR2 411 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 ZNF672Q499Z4 452 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-224ENST00000544990 SHEQ5VZ18 495 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 ANKRD16Q6P6B7 361 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 SLC22A25Q6T423 547 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 C16orf89Q6UX73 402 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 RRM2BQ7LG56 351 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 NANOGNBQ7Z5D8 188 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 CYP4Z1Q86W10 505 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 NKAIN4Q8IVV8 208 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 CCDC36Q8IYA8 594 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 CDK20Q8IZL9 346 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 PGAM4Q8N0Y7 254 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 LRRC75A-AS1Q8N1F1 130 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 WDR31Q8NA23 367 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 OR1K1Q8NGR3 316 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 OR6N1Q8NGY5 312 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 MAGEE2Q8TD90 523 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-224ENST00000544990 TMEM255BQ8WV15 326 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 SGTBQ96EQ0 304 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 PRRC1Q96M27 445 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 ADAD1Q96M93 576 aaKnown RBP6.45□□□□□ -1.38
CPSF7-224ENST00000544990 ALKBH3Q96Q83 286 aaPredicted RBP6.45□□□□□ -1.38
CPSF7-224ENST00000544990 OR2M2Q96R28 347 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 EMC6Q9BV81 110 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 FNDC11Q9BVV2 318 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 C1QTNF6Q9BXI9 259 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 CXorf56Q9H5V9 222 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 CRLF2Q9HC73 371 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 GPR35Q9HC97 309 aa6.45□□□□□ -1.38
CPSF7-224ENST00000544990 FAIMQ9NVQ4 179 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms