RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 NSMAFQ92636 917 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 AKAP1Q92667 903 aaKnown RBP eCLIP14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 HIST1H2ACQ93077 130 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 LCORQ96JN0 433 aaPredicted RBP14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 EMC6Q9BV81 110 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 EFCAB7A8K855 629 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 FBXW4P57775 412 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 RRAS2P62070 204 aaPredicted RBP14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 ACTC1P68032 377 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 ACTA1P68133 377 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 LGALS3BPQ08380 585 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 C14orf28Q4W4Y0 310 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 ZNF721Q8TF20 911 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 CYYR1Q96J86 154 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 C12orf10Q9HB07 376 aa14.29□□□□□ -0.12
SNRNP70-203ENST00000544278 LOC400499M0QZD8 3231 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 IGHV1OR21-1A0A087WYE8 117 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 SOX1O00570 391 aaPredicted RBP14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 HPXP02790 462 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 IL32P24001 234 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 RORAP35398 523 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 GDNFP39905 211 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 RBM34P42696 430 aaKnown RBP14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 AP2S1P53680 142 aaPredicted RBP14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 LAMTOR1Q6IAA8 161 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 OR11H7Q8NGC8 314 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 RNF166Q96A37 237 aaPredicted RBP14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 POM121Q96HA1 1249 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 ARL5BQ96KC2 179 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 ICAM5Q9UMF0 924 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 GLCEO94923 617 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 KDM4BO94953 1096 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 FBLP22087 321 aaKnown RBP14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 SLC6A1P30531 599 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 DCTDP32321 178 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 GUCA2AQ02747 115 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 DDOQ99489 341 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 MED28Q9H204 178 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 PRODH2Q9UF12 536 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 TCRBP04435 133 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 ABCD3P28288 659 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 EFNB2P52799 333 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 EBPQ15125 230 aaKnown RBP14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 OR10K2Q6IF99 312 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 FAM122BQ7Z309 247 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 MS4A15Q8N5U1 240 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 OR2T4Q8NH00 348 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 C1orf216Q8TAB5 229 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 SYNPRQ8TBG9 265 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 METTL21AQ8WXB1 218 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 TMEM106AQ96A25 262 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 MARVELD1Q9BSK0 173 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 DPCDQ9BVM2 203 aaPredicted RBP14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 ZNF304Q9HCX3 659 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 MED29Q9NX70 200 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 MED11Q9P086 117 aa14.28□□□□□ -0.12
SNRNP70-203ENST00000544278 TTC28Q96AY4 2481 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 ZNF879B4DU55 563 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 SLC25A12O75746 678 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 PIAS2O75928 621 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 SRFP11831 508 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 BDH1Q02338 343 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 FAM122CQ6P4D5 195 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 CFAP77Q6ZQR2 320 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 PLPP7Q8NBV4 271 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 SLC25A38Q96DW6 304 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 MICU1Q9BPX6 476 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 SEC22CQ9BRL7 303 aa14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 MS4A7Q9GZW8 240 aaPredicted RBP14.27□□□□□ -0.12
SNRNP70-203ENST00000544278 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.27□□□□□ -0.122e-10■□□□□ 10.6
SNRNP70-203ENST00000544278 OGG1O15527 345 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 CCKBRP32239 447 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 HNRNPKP61978 463 aaKnown RBP eCLIP14.27□□□□□ -0.134e-8■■■□□ 16.5
SNRNP70-203ENST00000544278 SKP1P63208 163 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 IGLV3-21P80748 117 aaPredicted RBP14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 SNTB2Q13425 540 aaKnown RBP14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 ACKR1Q16570 336 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 PLA1AQ53H76 456 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 OR11H4Q8NGC9 324 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 FBXW5Q969U6 566 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 KIAA1143Q96AT1 154 aaPredicted RBP14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 ZDHHC12Q96GR4 267 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 TCF7L1Q9HCS4 588 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 APMAPQ9HDC9 416 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 POLE3Q9NRF9 147 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 GPR27Q9NS67 375 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 FBXL3Q9UKT7 428 aa14.27□□□□□ -0.13
SNRNP70-203ENST00000544278 TRABD2BA6NFA1 517 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 LMO7DNF2Z398 122 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 SHOXO15266 292 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 LMX1BO60663 402 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 GATBO75879 557 aaKnown RBP14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 CTLA4P16410 223 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 PPICP45877 212 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 TAS2R43P59537 309 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 RPL22L1Q6P5R6 122 aaKnown RBP14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 TMEM65Q6PI78 240 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 ARSKQ6UWY0 536 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 ZNF527Q8NB42 609 aa14.26□□□□□ -0.13
SNRNP70-203ENST00000544278 OR51D1Q8NGF3 324 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms