RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 SRPX2O60687 465 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CTAG2O75638 210 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 ASAH2BP0C7U1 165 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 GRPRP30550 384 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 ACTBP60709 375 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 YPEL5P62699 121 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 ACTG1P63261 375 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 UBE2IP63279 158 aaKnown RBP12.47□□□□□ -0.41
VPS33A-208ENST00000543633 HYAL1Q12794 435 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 KLHL26Q53HC5 615 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 ALG10Q5BKT4 473 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 FAAP20Q6NZ36 180 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 TFAP2EQ6VUC0 442 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 NHLRC1Q6VVB1 395 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-208ENST00000543633 OR6M1Q8NGM8 313 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 OR5M9Q8NGP3 310 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 OR6K3Q8NGY3 331 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 MCHR2Q969V1 340 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 ARL6Q9H0F7 186 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 LDAHQ9H6V9 325 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 APMAPQ9HDC9 416 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 DZANK1Q9NVP4 752 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CYB5R1Q9UHQ9 305 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 ZNF107Q9UII5 783 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-208ENST00000543633 LAMP5Q9UJQ1 280 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CDV3Q9UKY7 258 aaKnown RBP12.47□□□□□ -0.41
VPS33A-208ENST00000543633 KLHDC2Q9Y2U9 406 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 K7EQS6 105 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 LINC01565O15544 149 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 RPP14O95059 124 aaKnown RBP12.47□□□□□ -0.41
VPS33A-208ENST00000543633 RASGRP1O95267 797 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CT45A8P0DMV1 189 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CT45A9P0DMV2 189 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 ZNF35P13682 527 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 PVRP15151 417 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 HNRNPA2B1P22626 353 aaKnown RBP12.47□□□□□ -0.41
VPS33A-208ENST00000543633 GALNSP34059 522 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CD96P40200 585 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 AQP2P41181 271 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 GPR3P46089 330 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 H2BFSP57053 126 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CTXN1P60606 82 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CT45A2Q5DJT8 189 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 FNDC7Q5VTL7 733 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 TSSK4Q6SA08 328 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 OOSP2Q86WS3 158 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 PDZD9Q8IXQ8 264 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 ZNF676Q8N7Q3 588 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 BCORP1Q8N888 145 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 ZNF511Q8NB15 262 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 BVESQ8NE79 360 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 TSACCQ96A04 125 aaPredicted RBP12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CXorf58Q96LI9 332 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 C4orf45Q96LM5 186 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 PELOQ9BRX2 385 aaKnown RBP12.47□□□□□ -0.41
VPS33A-208ENST00000543633 CAPN10Q9HC96 672 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 MMP25Q9NPA2 562 aa12.47□□□□□ -0.41
VPS33A-208ENST00000543633 TRAV8-7A0A075B6U6 113 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 OR5K4A6NMS3 321 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 H3BUI4 141 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 SLC17A2O00624 439 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 ARPC5O15511 151 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 RENP00797 406 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 UBBP0CG47 229 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 UBCP0CG48 685 aaKnown RBP12.46□□□□□ -0.41
VPS33A-208ENST00000543633 ALOX5APP20292 161 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 AGTR1P30556 359 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 MAGEB1P43366 347 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 SOX2P48431 317 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 RPS27AP62979 156 aaKnown RBP12.46□□□□□ -0.41
VPS33A-208ENST00000543633 UBA52P62987 128 aaKnown RBP12.46□□□□□ -0.41
VPS33A-208ENST00000543633 FUT7Q11130 342 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 EIF2B5Q13144 721 aaKnown RBP12.46□□□□□ -0.41
VPS33A-208ENST00000543633 TMEM196Q5HYL7 178 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 EEF1A1P5Q5VTE0 462 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 ARSKQ6UWY0 536 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 RD3Q7Z3Z2 195 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 OR5M1Q8NGP8 315 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 ZDHHC1Q8WTX9 485 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 ST8SIA4Q92187 359 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 BMFQ96LC9 184 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 OR1F2PQ96R84 312 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 PLA2G2FQ9BZM2 168 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 DNTTIP1Q9H147 329 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 SLC25A32Q9H2D1 315 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 PRO3102Q9H379 93 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 IGFLR1Q9H665 355 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 C12orf4Q9NQ89 552 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 CPNE7Q9UBL6 633 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 ERVK-19Q9WJR5 959 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 DTX4Q9Y2E6 619 aa12.46□□□□□ -0.41
VPS33A-208ENST00000543633 TRBV23OR9-2A0A075B6M9 112 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 FXYD6-FXYD2A0A087WZ82 144 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 KIR2DS5A0A0G2JLQ3 304 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 A0A0G2JNG1 304 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 LOC100289279A0A1B0GTE1 492 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 RFPL4AA6NLU0 287 aa12.45□□□□□ -0.42
VPS33A-208ENST00000543633 RFPL4AL1F8VTS6 287 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms