RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 FBXL2Q9UKC9 423 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SLC35A3Q9Y2D2 325 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CARD8Q9Y2G2 431 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 IGLV3-32A0A0A0MS00 114 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TRGV5A0A0B4J1U4 118 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CENPVL1A0A0U1RR11 272 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 A0A1B0GTH9 108 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CDHR4A6H8M9 788 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 PRORSD1PA6NEY8 169 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ANKUB1A6NFN9 424 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CGB1A6NKQ9 187 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CCT8L1PA6NM43 557 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 C17orf51A8MQB3 221 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 FAM220BPB1ANY3 271 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SELENOFO60613 162 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 HCN1O60741 890 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 GASTP01350 101 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 HPNP05981 417 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 PABPC4LP0CB38 370 aaKnown RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 UBTFL6P0CB48 400 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 THRBP10828 461 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ETS2P15036 469 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 HK1P19367 917 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TCEA1P23193 301 aaKnown RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 AZGP1P25311 298 aaKnown RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 AQP1P29972 269 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 GZMMP51124 257 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 P2RX1P51575 399 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TDGF1P3P51864 188 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CTAG1AP78358 180 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SLC25A3Q00325 362 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF117Q03924 483 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 IGFBP7Q16270 282 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ZSWIM7Q19AV6 140 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 VMACQ2NL98 169 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 NDUFAF6Q330K2 333 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 EIPR1Q53HC9 387 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CMPK2Q5EBM0 449 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 WBP2NLQ6ICG8 309 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TMEM211Q6ICI0 200 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TRILQ7L0X0 811 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 YRDCQ86U90 279 aaKnown RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CALHM3Q86XJ0 350 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 VRK2Q86Y07 508 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 PGAM4Q8N0Y7 254 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 BATF2Q8N1L9 274 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 FADS6Q8N9I5 356 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 DTX3Q8N9I9 347 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ST6GALNAC3Q8NDV1 305 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 FAM83FQ8NEG4 500 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 BHLHE22Q8NFJ8 381 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 LILRB4Q8NHJ6 448 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 SLC26A7Q8TE54 656 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TRMT61AQ96FX7 289 aaKnown RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF583Q96ND8 569 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TRIB1Q96RU8 372 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 KCTD14Q9BQ13 255 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ABHD6Q9BV23 337 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 HDHD5Q9BXW7 423 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 TRIM2Q9C040 744 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 LAT2Q9GZY6 243 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 UBQLN3Q9H347 655 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ACKR4Q9NPB9 350 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 CDC42EP3Q9UKI2 254 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF443Q9Y2A4 671 aaPredicted RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 MRPS18CQ9Y3D5 142 aaKnown RBP4.58□□□□□ -1.68
CLIP1-217ENST00000543205 U3KQV3 271 aa4.58□□□□□ -1.68
CLIP1-217ENST00000543205 DSPPQ9NZW4 1301 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ATMQ13315 3056 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 A0A087WZY1 265 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 CLDN24A6NM45 220 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 NPIPB6E9PJ23 425 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 NME4O00746 187 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ADAM10O14672 748 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 LANCL1O43813 399 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 GMNNO75496 209 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 IFNA14P01570 189 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 IGHG3P01860 377 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 SBK2P0C263 348 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 UQCRBP14927 111 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ABOP16442 354 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 PGCP20142 388 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 RPS4Y1P22090 263 aaKnown RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 PRKAR1BP31321 381 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 SLC6A8P48029 635 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 EEFSECP57772 596 aaKnown RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 LINC00310P59036 64 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 HSF1Q00613 529 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 SKP2Q13309 424 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 SNTB2Q13425 540 aaKnown RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 VEZF1Q14119 521 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 ZNF124Q15973 351 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 SNAPC1Q16533 368 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 GLYR1Q49A26 553 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 LBHQ53QV2 105 aaPredicted RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 MRPL2Q5T653 305 aaKnown RBP4.57□□□□□ -1.68
CLIP1-217ENST00000543205 RAET1LQ5VY80 246 aa4.57□□□□□ -1.68
CLIP1-217ENST00000543205 HMBOX1Q6NT76 420 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms