RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 GLTPQ9NZD2 209 aa16.12■□□□□ 0.17
COPS7A-216ENST00000543170 SIGLEC7Q9Y286 467 aa16.12■□□□□ 0.17
COPS7A-216ENST00000543170 TNFRSF11BO00300 401 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 OR10H3O60404 316 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 PTP4A3O75365 173 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 WNT11O96014 354 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 NR2C1P13056 603 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 RPL27P61353 136 aaKnown RBP16.11■□□□□ 0.17
COPS7A-216ENST00000543170 NCMAPQ5T1S8 102 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 OR2T5Q6IEZ7 315 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 C1orf94Q6P1W5 598 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 CCDC121Q6ZUS5 278 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 ASRGL1Q7L266 308 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 ZER1Q7Z7L7 766 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 OR2T29Q8NH02 315 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 OR52N5Q8NH56 324 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 BCL2L2Q92843 193 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-216ENST00000543170 PLPPR2Q96GM1 343 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 RSRC1Q96IZ7 334 aaKnown RBP16.11■□□□□ 0.17
COPS7A-216ENST00000543170 CHID1Q9BWS9 393 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 PLEKHF2Q9H8W4 249 aa16.11■□□□□ 0.17
COPS7A-216ENST00000543170 RAI1Q7Z5J4 1906 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-216ENST00000543170 TACC2O95359 2948 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 ANKRD17O75179 2603 aaKnown RBP16.1■□□□□ 0.17
COPS7A-216ENST00000543170 A0A1W2PPR1 153 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 TRMUO75648 421 aaKnown RBP16.1■□□□□ 0.17
COPS7A-216ENST00000543170 NDUFB2O95178 105 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 ACADSP16219 412 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 CDH2P19022 906 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-216ENST00000543170 ZNF133P52736 654 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-216ENST00000543170 CLRN1P58418 232 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 CTXN1P60606 82 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 SPATA24Q86W54 205 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 CCDC36Q8IYA8 594 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 PAPD5Q8NDF8 572 aaKnown RBP16.1■□□□□ 0.17
COPS7A-216ENST00000543170 ZNF519Q8TB69 540 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 FNDC8Q8TC99 324 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 ZNF837Q96EG3 531 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-216ENST00000543170 HS3ST6Q96QI5 342 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 ALG12Q9BV10 488 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 YY1AP1Q9H869 796 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 REEP1Q9H902 201 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 NPAP1Q9NZP6 1156 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 SPG11Q96JI7 2443 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 CSMD2Q7Z408 3487 aa16.1■□□□□ 0.17
COPS7A-216ENST00000543170 UNC119BA6NIH7 251 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 A6NIZ1 184 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 EBAG9O00559 213 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 CD14P08571 375 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 ZNF26P17031 533 aaPredicted RBP16.09■□□□□ 0.17
COPS7A-216ENST00000543170 GSSP48637 474 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 UBE2NP61088 152 aaKnown RBP16.09■□□□□ 0.17
COPS7A-216ENST00000543170 RAP1BP61224 184 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 RAP1AP62834 184 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 ARF1P84077 181 aaKnown RBP16.09■□□□□ 0.17
COPS7A-216ENST00000543170 RUNX1T1Q06455 604 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 NRN1LQ496H8 165 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 HIKESHIQ53FT3 197 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 PGBD2Q6P3X8 592 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 KLHL17Q6TDP4 642 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 NINJ1Q92982 152 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 TSPAN32Q96QS1 320 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 KCNK17Q96T54 332 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 GPA33Q99795 319 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 FOXB1Q99853 325 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 SMURF2Q9HAU4 748 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 ZNF346Q9UL40 294 aaKnown RBP16.09■□□□□ 0.17
COPS7A-216ENST00000543170 EDARQ9UNE0 448 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 POFUT2Q9Y2G5 429 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 CSMD1Q96PZ7 3565 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 POLQO75417 2590 aa16.09■□□□□ 0.17
COPS7A-216ENST00000543170 DHHO43323 396 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 ENTPD5O75356 428 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 CCNB2O95067 398 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 CST1P01037 141 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 CD3EP07766 207 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 PTAFRP25105 342 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 RPL4P36578 427 aaKnown RBP16.08■□□□□ 0.16
COPS7A-216ENST00000543170 FXYD6P3P58550 94 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 CBX1P83916 185 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 TSPAN31Q12999 210 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 TOP3AQ13472 1001 aaPredicted RBP16.08■□□□□ 0.16
COPS7A-216ENST00000543170 C3orf36Q3SXR2 165 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 C10orf128Q5T292 105 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 ZNF770Q6IQ21 691 aaPredicted RBP16.08■□□□□ 0.16
COPS7A-216ENST00000543170 ALKBH2Q6NS38 261 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 LRFN4Q6PJG9 635 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 SMARCD3Q6STE5 483 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 TMEM108Q6UXF1 575 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 PAMR1Q6UXH9 720 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 ZNF704Q6ZNC4 412 aaPredicted RBP16.08■□□□□ 0.16
COPS7A-216ENST00000543170 FAM122BQ7Z309 247 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 IGFN1Q86VF2 1251 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 FAM169BQ8N8A8 192 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 FANK1Q8TC84 345 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 GNPDA2Q8TDQ7 276 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 HDAC2Q92769 488 aaKnown RBP16.08■□□□□ 0.16
COPS7A-216ENST00000543170 NMD3Q96D46 503 aaKnown RBP16.08■□□□□ 0.16
COPS7A-216ENST00000543170 KATNB1Q9BVA0 655 aa16.08■□□□□ 0.16
COPS7A-216ENST00000543170 NRIP3Q9NQ35 241 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms