RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 CYLC2Q14093 348 aaPredicted RBP11.34□□□□□ -0.59
RTN3-212ENST00000543123 ZNF74Q16587 644 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 DUSP7Q16829 419 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 PHYHD1Q5SRE7 291 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 LINC00114Q6XXX2 140 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 SLC35D2Q76EJ3 337 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 DPPA2Q7Z7J5 298 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 ZNF786Q8N393 782 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 VANGL1Q8TAA9 524 aaPredicted RBP11.34□□□□□ -0.59
RTN3-212ENST00000543123 HPS1Q92902 700 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 ZNF566Q969W8 418 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 MSI2Q96DH6 328 aaKnown RBP11.34□□□□□ -0.59
RTN3-212ENST00000543123 TXNDC15Q96J42 360 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 PCDHAC1Q9H158 963 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 MS4A5Q9H3V2 200 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 ZNF385DQ9H6B1 395 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 CHODLQ9H9P2 273 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 NPHS2Q9NP85 383 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 SLC7A7Q9UM01 511 aa11.34□□□□□ -0.59
RTN3-212ENST00000543123 A0A0G2JND7 137 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 LRRN3E7EW58 273 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 C11orf98E9PRG8 122 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 STAMBPO95630 424 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 CH25HO95992 272 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 ADRA2AP08913 450 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 OR8G3PP0DMU2 310 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 UMPSP11172 480 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 ZNF14P17017 642 aaPredicted RBP11.33□□□□□ -0.6
RTN3-212ENST00000543123 IGFBP5P24593 272 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 GLRXP35754 106 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 GIPRP48546 466 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 RAB1AP62820 205 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 PIGFQ07326 219 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 ZP4Q12836 540 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 FAM120AOSQ5T036 256 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 NANOGNBQ7Z5D8 188 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 RETREG3Q86VR2 466 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 CDK20Q8IZL9 346 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 GPR32P1Q8NGA4 272 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 UBASH3BQ8TF42 649 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 MRPL24Q96A35 216 aaKnown RBP11.33□□□□□ -0.6
RTN3-212ENST00000543123 THOC1Q96FV9 657 aaKnown RBP11.33□□□□□ -0.6
RTN3-212ENST00000543123 SLC25A44Q96H78 314 aaPredicted RBP11.33□□□□□ -0.6
RTN3-212ENST00000543123 WFDC6Q9BQY6 131 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 POLR2J2Q9GZM3 115 aaKnown RBP11.33□□□□□ -0.6
RTN3-212ENST00000543123 POLR2J3Q9H1A7 115 aaKnown RBP11.33□□□□□ -0.6
RTN3-212ENST00000543123 C1orf198Q9H425 327 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 GLTPQ9NZD2 209 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 SLC7A8Q9UHI5 535 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 GPR160Q9UJ42 338 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 BAG5Q9UL15 447 aa11.33□□□□□ -0.6
RTN3-212ENST00000543123 ZNF346Q9UL40 294 aaKnown RBP11.33□□□□□ -0.6
RTN3-212ENST00000543123 YLPM1P49750 1951 aaKnown RBP11.33□□□□□ -0.6
RTN3-212ENST00000543123 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.33□□□□□ -0.62e-17■■■■□ 24.5
RTN3-212ENST00000543123 SLC22A23A1A5C7 686 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 SH3PXD2BA1X283 911 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 KPNA4O00629 521 aaPredicted RBP11.32□□□□□ -0.6
RTN3-212ENST00000543123 EDF1O60869 148 aaKnown RBP11.32□□□□□ -0.6
RTN3-212ENST00000543123 TGFAP01135 160 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 PTHP01270 115 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 IFNA14P01570 189 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 IGHG1P01857 330 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 TACSTD2P09758 323 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 ZNF35P13682 527 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 PCMT1P22061 227 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 APEX1P27695 318 aaKnown RBP11.32□□□□□ -0.6
RTN3-212ENST00000543123 SELENOVP59797 346 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 SELPLGQ14242 412 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 NPTX1Q15818 432 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 VMACQ2NL98 169 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 NRN1LQ496H8 165 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 TMEM53Q6P2H8 277 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 NHLRC1Q6VVB1 395 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 CCDC80Q76M96 950 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 SLC22A24Q8N4F4 322 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 OR10A6Q8NH74 314 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 TMEM54Q969K7 222 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 TAMM41Q96BW9 452 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 ZNF426Q9BUY5 554 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 STX18Q9P2W9 335 aaKnown RBP11.32□□□□□ -0.6
RTN3-212ENST00000543123 REV1Q9UBZ9 1251 aa11.32□□□□□ -0.6
RTN3-212ENST00000543123 A0A1W2PRG6 482 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 TMEM129A0AVI4 362 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 BBIP1A8MTZ0 92 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 CENPBD1B2RD01 187 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 MCIDASD6RGH6 385 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 MGRN1O60291 552 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 BCL10O95999 233 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 NPPAP01160 153 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 SERPINA5P05154 406 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 TROVE2P10155 538 aaKnown RBP eCLIP11.31□□□□□ -0.6
RTN3-212ENST00000543123 NR2C1P13056 603 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 RBM34P42696 430 aaKnown RBP11.31□□□□□ -0.6
RTN3-212ENST00000543123 DAP3P51398 398 aaKnown RBP11.31□□□□□ -0.6
RTN3-212ENST00000543123 ZNF84P51523 738 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 CLRN1P58418 232 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 MAPRE2Q15555 327 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 SLC36A2Q495M3 483 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 MMEL1Q495T6 779 aa11.31□□□□□ -0.6
RTN3-212ENST00000543123 COQ5Q5HYK3 327 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms