RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 THSD4Q6ZMP0 1018 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 FAM122BQ7Z309 247 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 LUZP2Q86TE4 346 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 HS3ST5Q8IZT8 346 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 UBE2J2Q8N2K1 259 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 LNX2Q8N448 690 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 C1orf162Q8NEQ5 155 aaPredicted RBP10.76□□□□□ -0.69
DDX55-210ENST00000543016 OR2T33Q8NG76 320 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 OR6N1Q8NGY5 312 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 ZNF519Q8TB69 540 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 TMEM54Q969K7 222 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 EME1Q96AY2 570 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 BOD1Q96IK1 185 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 SAMD8Q96LT4 415 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 ZNF570Q96NI8 536 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 RBP7Q96R05 134 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 IFT27Q9BW83 186 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 TSSK6Q9BXA6 273 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 MRPL13Q9BYD1 178 aaKnown RBP10.76□□□□□ -0.69
DDX55-210ENST00000543016 KRT84Q9NSB2 600 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 TBC1D23Q9NUY8 699 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 TAS2R16Q9NYV7 291 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 GLTPQ9NZD2 209 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 REV1Q9UBZ9 1251 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 ZNF346Q9UL40 294 aaKnown RBP10.76□□□□□ -0.69
DDX55-210ENST00000543016 ORC6Q9Y5N6 252 aa10.76□□□□□ -0.69
DDX55-210ENST00000543016 SAC3D1A6NKF1 404 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 C16orf97H3BN30 126 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 H3BN98 237 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 PDLIM1O00151 329 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 TRMUO75648 421 aaKnown RBP10.75□□□□□ -0.69
DDX55-210ENST00000543016 HMGN1P05114 100 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 PGA4P0DJD7 388 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 PGA3P0DJD8 388 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 COX5AP20674 150 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 IGFBP5P24593 272 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 ACVR1BP36896 505 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 ALDH3A2P51648 485 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 ZNF133P52736 654 aaPredicted RBP10.75□□□□□ -0.69
DDX55-210ENST00000543016 RAD23AP54725 363 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 CLRN1P58418 232 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 TFF3Q07654 80 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 CAMK2DQ13557 499 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 DAG1Q14118 895 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 HIST3H3Q16695 136 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 SLC36A3Q495N2 470 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 SFRP5Q5T4F7 317 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 SLC27A4Q6P1M0 643 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 ZBTB49Q6ZSB9 765 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 P2RY8Q86VZ1 359 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 LSRQ86X29 649 aaPredicted RBP10.75□□□□□ -0.69
DDX55-210ENST00000543016 PACRGLQ8N7B6 248 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 NOXO1Q8NFA2 376 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 STEAP2Q8NFT2 490 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 MAGEE2Q8TD90 523 aaPredicted RBP10.75□□□□□ -0.69
DDX55-210ENST00000543016 ERMAPQ96PL5 475 aaPredicted RBP10.75□□□□□ -0.69
DDX55-210ENST00000543016 TSPAN32Q96QS1 320 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 KCNK17Q96T54 332 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 EMC6Q9BV81 110 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 PRRG3Q9BZD7 231 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 ENKD1Q9H0I2 346 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 SLC7A10Q9NS82 523 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 GALNT8Q9NY28 637 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 PRSS50Q9UI38 385 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 IER3IP1Q9Y5U9 82 aa10.75□□□□□ -0.69
DDX55-210ENST00000543016 MAGED1Q9Y5V3 778 aaPredicted RBP10.75□□□□□ -0.69
DDX55-210ENST00000543016 SPTAN1Q13813 2472 aaKnown RBP10.74□□□□□ -0.69
DDX55-210ENST00000543016 PRSS37A4D1T9 235 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 NKX2-6A6NCS4 301 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 BHLHE40O14503 412 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 UPK3AO75631 287 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 IFNGP01579 166 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 TP53P04637 393 aaPredicted RBP10.74□□□□□ -0.69
DDX55-210ENST00000543016 ALPLP05186 524 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 GRK5P34947 590 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 GIPRP48546 466 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 CRISP1P54107 249 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 FAPQ12884 760 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 TOP3AQ13472 1001 aaPredicted RBP10.74□□□□□ -0.69
DDX55-210ENST00000543016 KRR1Q13601 381 aaKnown RBP10.74□□□□□ -0.69
DDX55-210ENST00000543016 MELKQ14680 651 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 NRN1LQ496H8 165 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 IGFN1Q86VF2 1251 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 CCDC36Q8IYA8 594 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 C17orf78Q8N4C9 275 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 CBR4Q8N4T8 237 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 KISS1RQ969F8 398 aaPredicted RBP10.74□□□□□ -0.69
DDX55-210ENST00000543016 Q96M85 177 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 RDH12Q96NR8 316 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 CIB1Q99828 191 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 ULBP2Q9BZM5 246 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 EGLN3Q9H6Z9 239 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 RNPEPL1Q9HAU8 725 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 SLC25A19Q9HC21 320 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 GPR35Q9HC97 309 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 MOV10Q9HCE1 1003 aaKnown RBP10.74□□□□□ -0.69
DDX55-210ENST00000543016 OBP2BQ9NPH6 170 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 VSX1Q9NZR4 365 aaPredicted RBP10.74□□□□□ -0.69
DDX55-210ENST00000543016 KLHL21Q9UJP4 597 aa10.74□□□□□ -0.69
DDX55-210ENST00000543016 ADAM18Q9Y3Q7 739 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms