RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 OR52A1Q9UKL2 312 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 TMEM184BQ9Y519 407 aaPredicted RBP12.09□□□□□ -0.47
TNC-212ENST00000542877 ALX3O95076 343 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 NSA2O95478 260 aaKnown RBP12.09□□□□□ -0.47
TNC-212ENST00000542877 MT-ATP6P00846 226 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 CHRM2P08172 466 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 GIPP09681 153 aaPredicted RBP12.09□□□□□ -0.47
TNC-212ENST00000542877 ICAM2P13598 275 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 OMGP23515 440 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 LBX1P52954 281 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 STK11Q15831 433 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 HEPHL1Q6MZM0 1159 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 DHRS4L2Q6PKH6 230 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 AAED1Q7RTV5 226 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SYT9Q86SS6 491 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 TRAPPC2LQ9UL33 140 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 A8MVM7 634 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 BCKDHBP21953 392 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SSTP61278 116 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 IKZF1Q13422 519 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 CCSMST1Q4G0I0 132 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 LYSMD4Q5XG99 296 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 KDM8Q8N371 416 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SLCO4A1Q96BD0 722 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 ISYNA1Q9NPH2 558 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SLC5A10A0PJK1 596 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SBK2P0C263 348 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 ETV1P50549 477 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 GABREP78334 506 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 ATPAF1Q5TC12 328 aaPredicted RBP12.09□□□□□ -0.47
TNC-212ENST00000542877 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SECTM1Q8WVN6 248 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 PIGMQ9H3S5 423 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 CA5BQ9Y2D0 317 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 HCFC2Q9Y5Z7 792 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 A0A087WUU8 490 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 ZNF195O14628 629 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
TNC-212ENST00000542877 PAPD4Q6PIY7 484 aaKnown RBP12.09□□□□□ -0.47
TNC-212ENST00000542877 FGGYQ96C11 551 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SEMA6CQ9H3T2 930 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 LYRM4Q9HD34 91 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 DUSP22Q9NRW4 184 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 SLC39A9Q9NUM3 307 aa12.09□□□□□ -0.47
TNC-212ENST00000542877 CYB5BO43169 146 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 EIF1BO60739 113 aaKnown RBP12.08□□□□□ -0.48
TNC-212ENST00000542877 POU3F3P20264 500 aaPredicted RBP12.08□□□□□ -0.48
TNC-212ENST00000542877 ZNF133P52736 654 aaPredicted RBP12.08□□□□□ -0.48
TNC-212ENST00000542877 KIAA1024LP59773 190 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 ADIPOR2Q86V24 386 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 RHBDD1Q8TEB9 315 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 EXOSC3Q9NQT5 275 aaKnown RBP12.08□□□□□ -0.48
TNC-212ENST00000542877 MARCH5Q9NX47 278 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 GPR160Q9UJ42 338 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.08□□□□□ -0.48
TNC-212ENST00000542877 SELENOFO60613 162 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 RNLSQ5VYX0 342 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 OR52W1Q6IF63 320 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 YIPF5Q969M3 257 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 LRFN5Q96NI6 719 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 SLC22A12Q96S37 553 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 NIPSNAP3BQ9BS92 247 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 TMEM43Q9BTV4 400 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 SCPEP1Q9HB40 452 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 SLC23A2Q9UGH3 650 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 MED16Q9Y2X0 877 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 MYH9P35579 1960 aaKnown RBP12.08□□□□□ -0.48
TNC-212ENST00000542877 ZAR1LA6NP61 321 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 TPPPO94811 219 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 PMP2P02689 132 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 SERPINF1P36955 418 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 EIF1P41567 113 aaKnown RBP12.08□□□□□ -0.48
TNC-212ENST00000542877 SRP9P49458 86 aaKnown RBP12.08□□□□□ -0.48
TNC-212ENST00000542877 TPMTP51580 245 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 TMEM41BQ5BJD5 291 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 DYNC2LI1Q8TCX1 351 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 GHRLQ9UBU3 117 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 OR14J1Q9UGF5 321 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 TCRBV5S2A0A599 114 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 GPX5O75715 221 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 CD53P19397 219 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 RFX2P48378 723 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 F2RL1P55085 397 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 PMPCAQ10713 525 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 CDC20Q12834 499 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 ZNF750Q32MQ0 723 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 GLYR1Q49A26 553 aaPredicted RBP12.08□□□□□ -0.48
TNC-212ENST00000542877 GDPD3Q7L5L3 318 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 LINC00346Q8IVM7 164 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 PRSS35Q8N3Z0 413 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 RASD2Q96D21 266 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 ABHD6Q9BV23 337 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 PRR14Q9BWN1 585 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 GNG13Q9P2W3 67 aa12.08□□□□□ -0.48
TNC-212ENST00000542877 GFYI3L273 518 aa12.07□□□□□ -0.48
TNC-212ENST00000542877 SCRG1O75711 98 aa12.07□□□□□ -0.48
TNC-212ENST00000542877 RAF1P04049 648 aa12.07□□□□□ -0.48
TNC-212ENST00000542877 PTGER4P35408 488 aa12.07□□□□□ -0.48
TNC-212ENST00000542877 OR10K2Q6IF99 312 aa12.07□□□□□ -0.48
TNC-212ENST00000542877 RBM45Q8IUH3 476 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms