RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 TMEM35AQ53FP2 167 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 TRMT12Q53H54 448 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 RAB12Q6IQ22 244 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 SLC36A1Q7Z2H8 476 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 CCDC36Q8IYA8 594 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 EIF4E3Q8N5X7 224 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 EID2Q8N6I1 236 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 OR2L5Q8NG80 312 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ZCCHC10Q8TBK6 192 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ZNF764Q96H86 408 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 NMNAT3Q96T66 252 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 NKX3-1Q99801 234 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 LGR4Q9BXB1 951 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ESRP2Q9H6T0 727 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 PRSS16Q9NQE7 514 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 NDRG3Q9UGV2 375 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ZNF281Q9Y2X9 895 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ADAM18Q9Y3Q7 739 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ANAPC1Q9H1A4 1944 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 A0A1B0GTH9 108 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 OR14I1A6ND48 311 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 RFPL4AA6NLU0 287 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 MPTX1A8MV57 137 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 RFPL4AL1F8VTS6 287 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 CCSO14618 274 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ZNF749O43361 778 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ZFPL1O95159 310 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 F12P00748 615 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 CD3DP04234 171 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 OR8G3PP0DMU2 310 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ADRB3P13945 408 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 MGMTP16455 207 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 CNR1P21554 472 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 FCARP24071 287 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 CAPZA2P47755 286 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 RAB13P51153 203 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ARFIP1P53367 373 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 PSMD4P55036 377 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 NANOS3P60323 173 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 BLOC1S1P78537 153 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 MRPS10P82664 201 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 CCINQ13939 588 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 SERTAD2Q14140 314 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 GUCA2BQ16661 112 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 SWI5Q1ZZU3 235 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 MAJINQ3KP22 176 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 AKIRIN2Q53H80 203 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ARHGAP11AQ6P4F7 1023 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 STAC2Q6ZMT1 411 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 NDUFAF7Q7L592 441 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 RAB11FIP2Q7L804 512 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 NRROSQ86YC3 692 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ETFBKMTQ8IXQ9 262 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 PM20D2Q8IYS1 436 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 PUSL1Q8N0Z8 303 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 C12orf45Q8N5I9 185 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 COX18Q8N8Q8 333 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 OR2A1Q8NGT9 310 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ZNRF4Q8WWF5 429 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ARRDC3Q96B67 414 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 LINC00615Q96LM1 132 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 MS4A4EQ96PG1 132 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 VRK1Q99986 396 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 CMSS1Q9BQ75 279 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 WNT5BQ9H1J7 359 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 BIN3Q9NQY0 253 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 APOBEC3BQ9UH17 382 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 CES1P1Q9UKY3 287 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ZNF346Q9UL40 294 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 KCNK6Q9Y257 313 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 TNRC18O15417 2968 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 SPTBP11277 2137 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 LOC100509620A0A075B734 347 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 TMEM272A0A1B0GTI8 110 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 A0A1W2PQU0 124 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 GXYLT2A0PJZ3 443 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 OTOL1A6NHN0 477 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 OR52A4PA6NMU1 304 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 F5H0A9 414 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 VEGFDO43915 354 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 DCNP07585 359 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 RPA2P15927 270 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 COL9A1P20849 921 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 DHPSP49366 369 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 RPS21P63220 83 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 EEF1A1P68104 462 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ZP2Q05996 745 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 ILF3Q12906 894 aaKnown RBP eCLIP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 IL10RAQ13651 578 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 MANEAQ5SRI9 462 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 LIN54Q6MZP7 749 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 UNQ6126/PRO20091Q6UXV3 157 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 TMPRSS11FQ6ZWK6 438 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 OR2W3Q7Z3T1 314 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 DND1Q8IYX4 353 aaKnown RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 SYS1Q8N2H4 156 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 LRRC25Q8N386 305 aaPredicted RBP4.85□□□□□ -1.63
KDM3B-209ENST00000542866 TMIEQ8NEW7 156 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 STEAP2Q8NFT2 490 aa4.85□□□□□ -1.63
KDM3B-209ENST00000542866 OR51D1Q8NGF3 324 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms