RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 LDB2O43679 373 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 SOX15O60248 233 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TBX19O60806 448 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 CTSVO60911 334 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ECI2O75521 394 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 B3GAT3O94766 335 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ZNF432O94892 652 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 FARS2O95363 451 aaKnown RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 IGSF6O95976 241 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 MT-CO2P00403 227 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 CD8AP01732 235 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 C1QCP02747 245 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 VTNP04004 478 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 SEMG1P04279 462 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 FABP3P05413 133 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 SFTPBP07988 381 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ANXA4P09525 319 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 SPATA31C1P0DKV0 1188 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 NCK1P16333 377 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 BPIP17213 487 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TACR2P21452 398 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 BTCP35070 178 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ARL4AP40617 200 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 P2RY2P41231 377 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 SULT1A1P50225 295 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 VAMP7P51809 220 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 POLR2JP52435 117 aaKnown RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 SNRPGP62308 76 aaKnown RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 HIST1H3AP68431 136 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 AIMP2Q13155 320 aaKnown RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ITPK1Q13572 414 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 IL10RAQ13651 578 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM132DQ14C87 1099 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 NSDHLQ15738 373 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM183BQ1AE95 376 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 PRTGQ2VWP7 1150 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 FBLN7Q53RD9 439 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 XKR7Q5GH72 579 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TCTEX1D4Q5JR98 221 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 RAB41Q5JT25 222 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM201Q5SNT2 666 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 MFSD14BQ5SR56 506 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 NBPF12Q5TAG4 269 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM164Q5U3C3 297 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 MARC1Q5VT66 337 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 PRAMEF17Q5VTA0 474 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 AGBL4Q5VU57 503 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 YOD1Q5VVQ6 348 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 CST9Q5W186 159 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 GLT8D1Q68CQ7 371 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 HBMQ6B0K9 141 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM225Q6GV28 225 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 OR2T2Q6IF00 324 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 CD200R1LQ6Q8B3 271 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 KIRREL2Q6UWL6 708 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 MPZL3Q6UWV2 235 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ABHD15Q6UXT9 468 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 DET1Q7L5Y6 550 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM144Q7Z5S9 345 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMPRSS11BQ86T26 416 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 CUZD1Q86UP6 607 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 GLCCI1Q86VQ1 547 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 KCNMB4Q86W47 210 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ZDHHC21Q8IVQ6 265 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 FBXO16Q8IX29 292 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 IZUMO1Q8IYV9 350 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TNS4Q8IZW8 715 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 LYG1Q8N1E2 194 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ARL14EPQ8N8R7 260 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 NECAP1Q8NC96 275 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 B3GNT7Q8NFL0 401 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 OR4D5Q8NGN0 318 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 FAM110BQ8TC76 370 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 RNF133Q8WVZ7 376 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM106AQ96A25 262 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 MOB3AQ96BX8 217 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 HAVCR1Q96D42 359 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM169Q96HH4 297 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 RAX2Q96IS3 184 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 MRGPRX3Q96LB0 322 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TEX37Q96LM6 180 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 IL4I1Q96RQ9 567 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 OSMRQ99650 979 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 COLEC11Q9BWP8 271 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 FAIM2Q9BWQ8 316 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ZNF471Q9BX82 626 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 SLC25A31Q9H0C2 315 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ZBP1Q9H171 429 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 VCX2Q9H322 139 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 SRMSQ9H3Y6 488 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 CST9LQ9H4G1 147 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 TMEM185BQ9H7F4 350 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 AUNIPQ9H7T9 357 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 METTL7AQ9H8H3 244 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 CHODLQ9H9P2 273 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 NRIP3Q9NQ35 241 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 MBNL1Q9NR56 388 aaKnown RBP4.76□□□□□ -1.65
SNHG1-218ENST00000541615 ASB6Q9NWX5 421 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 SEMA5BQ9P283 1151 aa4.76□□□□□ -1.65
SNHG1-218ENST00000541615 MSRAQ9UJ68 235 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms