RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 JAGN1Q8N5M9 183 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 CCDC185Q8N715 623 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 CLEC18CQ8NCF0 446 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 OR4F6Q8NGB9 312 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 OR6Q1Q8NGQ2 317 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 OR52N5Q8NH56 324 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 C2orf15Q8WU43 125 aaKnown RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 B3GALT6Q96L58 329 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 Q96MF0 132 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 OLFM3Q96PB7 478 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 XPO6Q96QU8 1125 aaKnown RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 PSD2Q9BQI7 771 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 MRPL45Q9BRJ2 306 aaKnown RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 COMMD4Q9H0A8 199 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 CXXC4Q9H2H0 198 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 WDR54Q9H977 334 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 MAP6D1Q9H9H5 199 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 SIX2Q9NPC8 291 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 NANSQ9NR45 359 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 ZFP57Q9NU63 452 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 PURGQ9UJV8 347 aaKnown RBP4.82□□□□□ -1.64
DDB1-219ENST00000541513 NUP50Q9UKX7 468 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 POMT2Q9UKY4 750 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 TTC28Q96AY4 2481 aa4.82□□□□□ -1.64
DDB1-219ENST00000541513 TRBV5-3A0A0A0MS03 114 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 GRID2IPA4D2P6 1211 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 PI15O43692 258 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 SH3BGRLO75368 114 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 DIRAS1O95057 198 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 LRATO95237 230 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 GLUD1P00367 558 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 HLA-HP01893 362 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 GNAO1P09471 354 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 CD3GP09693 182 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 ADORA3P0DMS8 318 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 MBL2P11226 248 aaPredicted RBP4.81□□□□□ -1.64
DDB1-219ENST00000541513 CBR1P16152 277 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 GM2AP17900 193 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 PMCHP20382 165 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 BCKDHBP21953 392 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 TEAD1P28347 426 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 EPHA2P29317 976 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 UGT1A3P35503 534 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 REEP5Q00765 189 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 SERTAD2Q14140 314 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 WHAMMP3Q1A5X7 153 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 ZNF284Q2VY69 593 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 SLC25A52Q3SY17 297 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 SLC22A6Q4U2R8 563 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 KLHL22Q53GT1 634 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 PAN3Q58A45 887 aaKnown RBP4.81□□□□□ -1.64
DDB1-219ENST00000541513 TCEAL5Q5H9L2 206 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 COQ5Q5HYK3 327 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 TEX30Q5JUR7 227 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 BRMS1LQ5PSV4 323 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 UTF1Q5T230 341 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 DDI2Q5TDH0 399 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 IDO2Q6ZQW0 420 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 Q6ZRG5 221 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 Q6ZSN1 163 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 LANCL3Q6ZV70 420 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 HIPK1Q86Z02 1210 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 GID4Q8IVV7 300 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 ENTHD1Q8IYW4 607 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 LGI4Q8N135 537 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 CENPSQ8N2Z9 138 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 MARVELD2Q8N4S9 558 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 PRR26Q8N8Z3 221 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 TTC29Q8NA56 475 aaPredicted RBP4.81□□□□□ -1.64
DDB1-219ENST00000541513 C19orf18Q8NEA5 215 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 LGALS14Q8TCE9 139 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 SPPL2BQ8TCT7 592 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 TMEM255BQ8WV15 326 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 PHLDA1Q8WV24 401 aaPredicted RBP4.81□□□□□ -1.64
DDB1-219ENST00000541513 NTAN1Q96AB6 310 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 TIMD4Q96H15 378 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 RITA1Q96K30 269 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 KCNA7Q96RP8 456 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 CYP2S1Q96SQ9 504 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 CNN2Q99439 309 aaKnown RBP4.81□□□□□ -1.64
DDB1-219ENST00000541513 PKMYT1Q99640 499 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 ECSITQ9BQ95 431 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 SYT15Q9BQS2 421 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 NIPSNAP3BQ9BS92 247 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 ALG9Q9H6U8 611 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 FOLH1BQ9HBA9 442 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 NECAP2Q9NVZ3 263 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 ZNF282Q9UDV7 671 aaPredicted RBP4.81□□□□□ -1.64
DDB1-219ENST00000541513 FAF1Q9UNN5 650 aaPredicted RBP4.81□□□□□ -1.64
DDB1-219ENST00000541513 MMP24Q9Y5R2 645 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 CDH10Q9Y6N8 788 aa4.81□□□□□ -1.64
DDB1-219ENST00000541513 HELZP42694 1942 aaKnown RBP4.81□□□□□ -1.64
DDB1-219ENST00000541513 NUP210Q8TEM1 1887 aaPredicted RBP4.81□□□□□ -1.64
DDB1-219ENST00000541513 C5orf60A6NFR6 353 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 A8MX80 341 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 XRCC2O43543 280 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 SNAI2O43623 268 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 FOXS1O43638 330 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 SOX30O94993 753 aa4.8□□□□□ -1.64
DDB1-219ENST00000541513 FARS2O95363 451 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms