RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 RAB1BQ9H0U4 201 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 DYNLRB1Q9NP97 96 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 B3GAT2Q9NPZ5 323 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 MEPEQ9NQ76 525 aaPredicted RBP12.48□□□□□ -0.41
MSRB3-209ENST00000540804 MYEF2Q9P2K5 600 aaKnown RBP12.48□□□□□ -0.41
MSRB3-209ENST00000540804 CDC42EP3Q9UKI2 254 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 TRIM33Q9UPN9 1127 aa12.48□□□□□ -0.41
MSRB3-209ENST00000540804 TRAPPC13A5PLN9 417 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 RNF13O43567 381 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 OR6A2O95222 327 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 MT-ATP6P00846 226 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 CCL2P13500 99 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF23P17027 643 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 ALDH3B1P43353 468 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 GZMKP49863 264 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 SEC24CP53992 1094 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 MYBPC1Q00872 1141 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 RUNX1T1Q06455 604 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 MAD2L1BPQ15013 274 aaPredicted RBP12.47□□□□□ -0.41
MSRB3-209ENST00000540804 NANOGP8Q6NSW7 305 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 CGB2Q6NT52 195 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 LRFN4Q6PJG9 635 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF627Q7L945 461 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 PATL1Q86TB9 770 aaKnown RBP12.47□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF584Q8IVC4 421 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 NKAIN4Q8IVV8 208 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 CCDC36Q8IYA8 594 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 SLC26A7Q8TE54 656 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 STON2Q8WXE9 905 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 SHARPINQ9H0F6 387 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 EVA1AQ9H8M9 152 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 NANOGQ9H9S0 305 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 MOV10Q9HCE1 1003 aaKnown RBP12.47□□□□□ -0.41
MSRB3-209ENST00000540804 NANSQ9NR45 359 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 GLTPQ9NZD2 209 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 CMAHPQ9Y471 501 aa12.47□□□□□ -0.41
MSRB3-209ENST00000540804 FXYD1O00168 92 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 RAB36O95755 333 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 TGFAP01135 160 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 F13BP05160 661 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 ASAH2BP0C7U1 165 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 UMPSP11172 480 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 H2AFXP16104 143 aaPredicted RBP12.46□□□□□ -0.41
MSRB3-209ENST00000540804 UGT2B15P54855 530 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 ZP4Q12836 540 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 ALKBH6Q3KRA9 238 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 FAM120AOSQ5T036 256 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 FAM166AQ6J272 317 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 CARM1Q86X55 608 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 CALHM3Q86XJ0 350 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 PAQR4Q8N4S7 273 aaPredicted RBP12.46□□□□□ -0.41
MSRB3-209ENST00000540804 OR6X1Q8NH79 312 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 MRPL24Q96A35 216 aaKnown RBP12.46□□□□□ -0.41
MSRB3-209ENST00000540804 SNX18Q96RF0 628 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF347Q96SE7 839 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 ZNF426Q9BUY5 554 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 OR51B6Q9H340 312 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 GMPR2Q9P2T1 348 aaKnown RBP12.46□□□□□ -0.41
MSRB3-209ENST00000540804 KCNS2Q9ULS6 477 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 SH3GLB1Q9Y371 365 aa12.46□□□□□ -0.41
MSRB3-209ENST00000540804 ARFGEF3Q5TH69 2177 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 BLOC1S5-TXNDC5H3BN57 136 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 LILRA1O75019 489 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 QDPRP09417 244 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 PGA4P0DJD7 388 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 PGA3P0DJD8 388 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 FUT1P19526 365 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 FUT4P22083 530 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 OR1E2P47887 323 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 FXNQ16595 210 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 TRMT5Q32P41 509 aaKnown RBP12.45□□□□□ -0.42
MSRB3-209ENST00000540804 GKAP1Q5VSY0 366 aaPredicted RBP12.45□□□□□ -0.42
MSRB3-209ENST00000540804 REP15Q6BDI9 236 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 DEF8Q6ZN54 512 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 CCDC80Q76M96 950 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 SLC22A24Q8N4F4 322 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 IL17RDQ8NFM7 739 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 UBASH3BQ8TF42 649 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 TSPEARQ8WU66 669 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 TMEM255BQ8WV15 326 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 NEU4Q8WWR8 484 aaPredicted RBP12.45□□□□□ -0.42
MSRB3-209ENST00000540804 ZNF566Q969W8 418 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 LRRC58Q96CX6 371 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 PCDHAC1Q9H158 963 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 HEATR1Q9H583 2144 aaKnown RBP12.45□□□□□ -0.42
MSRB3-209ENST00000540804 VIPAS39Q9H9C1 493 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 MYOZ1Q9NP98 299 aaPredicted RBP12.45□□□□□ -0.42
MSRB3-209ENST00000540804 C20orf141Q9NUB4 165 aa12.45□□□□□ -0.42
MSRB3-209ENST00000540804 ATRQ13535 2644 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 LOC100653049A0A140TA62 436 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 VSTM5A8MXK1 200 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 DHHO43323 396 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 KRT34O76011 436 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 UBL3O95164 117 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 HPXP02790 462 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 HIST1H2ABP04908 130 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 FAM157BP0CG42 384 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 COL8A2P25067 703 aa12.44□□□□□ -0.42
MSRB3-209ENST00000540804 GIFP27352 417 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms