RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 FAM78AQ5JUQ0 283 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 LIN54Q6MZP7 749 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 DPY19L4Q7Z388 723 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 PRSS35Q8N3Z0 413 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 GALNT16Q8N428 558 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 C10orf53Q8N6V4 93 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 ZNF676Q8N7Q3 588 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 TMEM185AQ8NFB2 350 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 OR4C3Q8NH37 302 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 FLVCR1-AS1Q8TAF5 88 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 NT5CQ8TCD5 201 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 MOGAT1Q96PD6 335 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 TRIM2Q9C040 744 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 TINAGL1Q9GZM7 467 aaPredicted RBP12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 LMAN2LQ9H0V9 348 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 RASL12Q9NYN1 266 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 LRIT1Q9P2V4 623 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 SLC6A5Q9Y345 797 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 RFPL4AA6NLU0 287 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 RFPL4AL1F8VTS6 287 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 H0Y8X5 98 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 ALOX12BO75342 701 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 TPPPO94811 219 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 GPR75O95800 540 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 OR4E1P0C645 316 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 RBM34P42696 430 aaKnown RBP12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 SFTPA2Q8IWL1 248 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 SAMD14Q8IZD0 417 aaPredicted RBP12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 PLPP7Q8NBV4 271 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 OR1J2Q8NGS2 313 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 SPACA7Q96KW9 195 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 SLC17A4Q9Y2C5 497 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 ETV7Q9Y603 341 aa12.65□□□□□ -0.38
SCNN1A-215ENST00000540037 GMFGO60234 142 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 AKR7A3O95154 331 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ABHD16AO95870 558 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 WDPCPO95876 746 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 AKAIN1P0CW23 69 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 STARP49675 285 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 SGCGQ13326 291 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 CLVS2Q5SYC1 327 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 STEAP1BQ6NZ63 245 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ANKRD16Q6P6B7 361 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 FAM220AQ7Z4H9 259 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 MCATQ8IVS2 390 aaKnown RBP12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 OR6N2Q8NGY6 317 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 KLHDC3Q9BQ90 382 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 A0A087WV62 115 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 TRBV5-5A0A0J9YX44 114 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 A0A1W2PQU0 124 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 POM121BA6NF01 834 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 OR4C45A6NMZ5 311 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 H0YGG7 62 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 FGF19O95750 216 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 F12P00748 615 aaPredicted RBP12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 CSF1P09603 554 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ARF3P61204 181 aaPredicted RBP12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 C2orf76Q3KRA6 126 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ARHGAP40Q5TG30 622 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF227Q86WZ6 799 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 BEST3Q8N1M1 668 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 CLEC1AQ8NC01 280 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 SLAIN1Q8ND83 568 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 STEAP2Q8NFT2 490 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 OR2G2Q8NGZ5 317 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 OR14C36Q8NHC7 312 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 FAM3CQ92520 227 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF524Q96C55 264 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ELF4Q99607 663 aaPredicted RBP12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 KIR3DX1Q9H7L2 352 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 PRELID3BQ9Y3B1 194 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF175Q9Y473 711 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 NKX2-2O95096 273 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 LSSP48449 732 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 SERTAD2Q14140 314 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 TAF13Q15543 124 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 PRRT3Q5FWE3 981 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 JMJD6Q6NYC1 403 aaPredicted RBP12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 RCBTB1Q8NDN9 531 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ANKRD9Q96BM1 317 aaPredicted RBP12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ATG5Q9H1Y0 275 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC25A32Q9H2D1 315 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 SLC6A15Q9H2J7 730 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 ZNF768Q9H5H4 540 aaKnown RBP12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 GTF2A1LQ9UNN4 478 aa12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 FARSAQ9Y285 508 aaKnown RBP12.64□□□□□ -0.39
SCNN1A-215ENST00000540037 IGKV1D-42A0A075B6H8 117 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 A0A087WUJ7 227 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 OR5H14A6NHG9 310 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 CCKBRP32239 447 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 CSF2RBP32927 897 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 MNDAP41218 407 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 DMWDQ09019 674 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 GUCA2BQ16661 112 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 PABPC1L2AQ5JQF8 200 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 ASPHD2Q6ICH7 369 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 FIGLAQ6QHK4 219 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 KRT77Q7Z794 578 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 CBLN2Q8IUK8 224 aa12.63□□□□□ -0.39
SCNN1A-215ENST00000540037 GABRG1Q8N1C3 465 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms