RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 TFAP2EQ6VUC0 442 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 CA13Q8N1Q1 262 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 CAMKVQ8NCB2 501 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 RCBTB1Q8NDN9 531 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 RERGQ96A58 199 aaPredicted RBP18.46■□□□□ 0.54
TMEM260-203ENST00000539559 ZNF578Q96N58 590 aaPredicted RBP18.46■□□□□ 0.54
TMEM260-203ENST00000539559 MOGAT1Q96PD6 335 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 LMF1Q96S06 567 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 S1PR5Q9H228 398 aa18.46■□□□□ 0.54
TMEM260-203ENST00000539559 CD3DP04234 171 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 EID2Q8N6I1 236 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 ATOH1Q92858 354 aaPredicted RBP18.45■□□□□ 0.54
TMEM260-203ENST00000539559 CTHRC1Q96CG8 243 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 ZFYVE21Q9BQ24 234 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 WDR76Q9H967 626 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 HEBP2Q9Y5Z4 205 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 URADA6NGE7 173 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 NPSR1Q6W5P4 371 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 OR9A4Q8NGU2 314 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 RPS4Y2Q8TD47 263 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 PPP1R14AQ96A00 147 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 ELF4Q99607 663 aaPredicted RBP18.45■□□□□ 0.54
TMEM260-203ENST00000539559 UTP23Q9BRU9 249 aaKnown RBP18.45■□□□□ 0.54
TMEM260-203ENST00000539559 MFFQ9GZY8 342 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 MED11Q9P086 117 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 MYEF2Q9P2K5 600 aaKnown RBP18.45■□□□□ 0.54
TMEM260-203ENST00000539559 FBXL21Q9UKT6 434 aa18.45■□□□□ 0.54
TMEM260-203ENST00000539559 KRBOX1C9JBD0 128 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 H7C417 338 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 ADH1BP00325 375 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 CSTAP01040 98 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 CD1AP06126 327 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 CCR4P51679 360 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 TSSK4Q6SA08 328 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 FAM220AQ7Z4H9 259 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 PDZD9Q8IXQ8 264 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 ZNF676Q8N7Q3 588 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 LSM14AQ8ND56 463 aaKnown RBP18.44■□□□□ 0.54
TMEM260-203ENST00000539559 OR6N2Q8NGY6 317 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 PHYHIPQ92561 330 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 CCDC74AQ96AQ1 378 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 KLHDC3Q9BQ90 382 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 MTFP1Q9UDX5 166 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 GON4LQ3T8J9 2241 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 SDC3O75056 442 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 AK1P00568 194 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 GRM7Q14831 915 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 TMED4Q7Z7H5 227 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 JAZF1Q86VZ6 243 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 MRPS24Q96EL2 167 aaKnown RBP18.44■□□□□ 0.54
TMEM260-203ENST00000539559 AMELYQ99218 206 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 DPYSL5Q9BPU6 564 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 EXO5Q9H790 373 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 SPACA6W5XKT8 324 aa18.44■□□□□ 0.54
TMEM260-203ENST00000539559 A0A087WUJ7 227 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 TGFBR3LH3BV60 316 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 LIPCP11150 499 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 S1PR1P21453 382 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 TNFRSF4P43489 277 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 BEX5Q5H9J7 111 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 DPY19L4Q7Z388 723 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 LYRM4Q9HD34 91 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 PRDM9Q9NQV7 894 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 GTF2A1LQ9UNN4 478 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 HRH3Q9Y5N1 445 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 IGKV1D-42A0A075B6H8 117 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 XRCC3O43542 346 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 ZNF10P21506 573 aaPredicted RBP18.43■□□□□ 0.54
TMEM260-203ENST00000539559 MST1P26927 711 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 TPMTP51580 245 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 CTXN1P60606 82 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 DLX2Q07687 328 aaPredicted RBP18.43■□□□□ 0.54
TMEM260-203ENST00000539559 ETFDHQ16134 617 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 ZCCHC12Q6PEW1 402 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 CDH26Q8IXH8 852 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 FRMD1Q8N878 549 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 ST8SIA2Q92186 375 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 MARC2Q969Z3 335 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 ZNF524Q96C55 264 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 EVA1AQ9H8M9 152 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 ZMAT3Q9HA38 289 aaKnown RBP18.43■□□□□ 0.54
TMEM260-203ENST00000539559 ZNF337Q9Y3M9 751 aa18.43■□□□□ 0.54
TMEM260-203ENST00000539559 HMSDA8MTL9 139 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 DOK2O60496 412 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 CTAG2O75638 210 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 AKR7A3O95154 331 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 MECP2P51608 486 aaKnown RBP18.42■□□□□ 0.54
TMEM260-203ENST00000539559 MRPS10P82664 201 aaKnown RBP18.42■□□□□ 0.54
TMEM260-203ENST00000539559 LRRC37A5PQ49AS3 106 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 NKAIN2Q5VXU1 208 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 B3GNTL1Q67FW5 361 aaPredicted RBP18.42■□□□□ 0.54
TMEM260-203ENST00000539559 OR5M9Q8NGP3 310 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 SLC25A28Q96A46 364 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 C3orf49Q96BT1 292 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.42■□□□□ 0.54
TMEM260-203ENST00000539559 GGT3PA6NGU5 568 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 OIP5O43482 229 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 POU3F4P49335 361 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 GPR143P51810 404 aa18.42■□□□□ 0.54
TMEM260-203ENST00000539559 SLC35D3Q5M8T2 416 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms