RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 FBXL21Q9UKT6 434 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 NPFFR2Q9Y5X5 522 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 RTTNQ86VV8 2226 aa11.43□□□□□ -0.58
SFSWAP-208ENST00000539506 IFITM5A6NNB3 132 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 BLOC1S5-TXNDC5H3BN57 136 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 OGG1O15527 345 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 CLPSP04118 112 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 IFNA16P05015 189 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 DRD1P21728 446 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 LTBRP36941 435 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 MRPS21P82921 87 aaKnown RBP11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 LGALS3BPQ08380 585 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 ETFDHQ16134 617 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 CSRP2Q16527 193 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 ARHGAP11AQ6P4F7 1023 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 ULK3Q6PHR2 472 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 SEZ6L2Q6UXD5 910 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 SLC35F2Q8IXU6 374 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 PPP1R14AQ96A00 147 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 SMIM19Q96E16 107 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 RBM18Q96H35 190 aaKnown RBP11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 PTDSS2Q9BVG9 487 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 NRIP3Q9NQ35 241 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 FBXO4Q9UKT5 387 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 IGKV1D-42A0A075B6H8 117 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 FAM221BA6H8Z2 402 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 OIP5O43482 229 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 F12P00748 615 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 IFI6P09912 130 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 RABIFP47224 123 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 SQSTM1Q13501 440 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 UBE2NLQ5JXB2 153 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 Q6ZS52 159 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 GLB1L2Q8IW92 636 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 MUC20Q8N307 709 aaPredicted RBP11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 C10orf53Q8N6V4 93 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 BCORP1Q8N888 145 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 C19orf47Q8N9M1 422 aaKnown RBP11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 OR51S1Q8NGJ8 323 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 SLC2A12Q8TD20 617 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 EVA1AQ9H8M9 152 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 FBXL3Q9UKT7 428 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 ERVK-19Q9WJR5 959 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 KIR2DS5A0A0G2JLQ3 304 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 A0A0G2JNG1 304 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 TMEM72A0PK05 275 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 B4DGG1 531 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 KIR2DS3K7RE56 304 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 ARL6IP5O75915 188 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 KIR2DS5Q14953 304 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 POMZP3Q6PJE2 187 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 GSG1LQ6UXU4 331 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 OOSP2Q86WS3 158 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNF321PQ8N8H1 164 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 OR1S1Q8NH92 325 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 S100A16Q96FQ6 103 aaKnown RBP11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 MAP3K3Q99759 626 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 ABRACLQ9P1F3 81 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 NCDNQ9UBB6 729 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 CYP8B1Q9UNU6 501 aa11.42□□□□□ -0.58
SFSWAP-208ENST00000539506 A0A087WUJ7 227 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 PRAMEF26H0Y7S4 382 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 NDUFB2O95178 105 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 THEGLP0DJG4 465 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 FAM160A2Q8N612 972 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 TEX19Q8NA77 164 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 RGP1Q92546 391 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 C3orf49Q96BT1 292 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 LRRC46Q96FV0 321 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNF75AQ96N20 296 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 ACTR6Q9GZN1 396 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNF768Q9H5H4 540 aaKnown RBP11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 ZCCHC4Q9H5U6 513 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 FOXJ3Q9UPW0 622 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 SEC16AO15027 2179 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 TAS2R43P59537 309 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 CCINQ13939 588 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 GGTLC2Q14390 218 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 ZNHIT3Q15649 155 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 CD226Q15762 336 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 LRRN1Q6UXK5 716 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 OR51D1Q8NGF3 324 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 CNN2Q99439 309 aaKnown RBP11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 MFFQ9GZY8 342 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 IKZF2Q9UKS7 526 aa11.41□□□□□ -0.58
SFSWAP-208ENST00000539506 FAM25EA8MYX2 175 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 M0QYG6 137 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 CTNSO60931 367 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 SDC3O75056 442 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 CSTAP01040 98 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 OR2T7P0C7T2 308 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 SPI1P17947 270 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 ADRA2CP18825 462 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 MST1P26927 711 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 DPP4P27487 766 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 TAS2R20P59543 309 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 ACTC1P68032 377 aa11.4□□□□□ -0.58
SFSWAP-208ENST00000539506 ACTA1P68133 377 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms