RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SF3B5Q9BWJ5 86 aaKnown RBP12.59□□□□□ -0.39
CD4-208ENST00000538827 OR51V1Q9H2C8 321 aa12.59□□□□□ -0.39
CD4-208ENST00000538827 RERGLQ9H628 205 aa12.59□□□□□ -0.39
CD4-208ENST00000538827 FANCFQ9NPI8 374 aa12.59□□□□□ -0.39
CD4-208ENST00000538827 RPRD1BQ9NQG5 326 aaKnown RBP12.59□□□□□ -0.39
CD4-208ENST00000538827 CLEC4AQ9UMR7 237 aa12.59□□□□□ -0.39
CD4-208ENST00000538827 MYRFQ9Y2G1 1151 aa12.59□□□□□ -0.39
CD4-208ENST00000538827 C2CD3Q4AC94 2353 aa12.59□□□□□ -0.39
CD4-208ENST00000538827 NPIPB13A6NJU9 1138 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 ZNF726A6NNF4 738 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 ZNF716A6NP11 495 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 KDM4EB2RXH2 506 aaPredicted RBP12.58□□□□□ -0.4
CD4-208ENST00000538827 NPIPB4C9JG80 1138 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 M0R3G1 203 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 XPNPEP2O43895 674 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 TRMUO75648 421 aaKnown RBP12.58□□□□□ -0.4
CD4-208ENST00000538827 AQP8O94778 261 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 CLUP10909 449 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 TDGF1P3P51864 188 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 TEKQ02763 1124 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 DBPQ10586 325 aaPredicted RBP12.58□□□□□ -0.4
CD4-208ENST00000538827 CAMK2DQ13557 499 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 APOFQ13790 326 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 SLC17A1Q14916 467 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 OCLNQ16625 522 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 KRTCAP3Q53RY4 240 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 RBM48Q5RL73 367 aaKnown RBP12.58□□□□□ -0.4
CD4-208ENST00000538827 TMEM201Q5SNT2 666 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 ARMC4Q5T2S8 1044 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 MEDAGQ5VYS4 303 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 NXNL2Q5VZ03 156 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 ZNF324BQ6AW86 544 aaPredicted RBP12.58□□□□□ -0.4
CD4-208ENST00000538827 NIPAL3Q6P499 406 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 CREB3L2Q70SY1 520 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 ZNF775Q96BV0 537 aaPredicted RBP12.58□□□□□ -0.4
CD4-208ENST00000538827 ZNF385AQ96PM9 386 aaKnown RBP12.58□□□□□ -0.4
CD4-208ENST00000538827 NR1H4Q96RI1 486 aaPredicted RBP12.58□□□□□ -0.4
CD4-208ENST00000538827 HCAR1Q9BXC0 346 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 SYT4Q9H2B2 425 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 AMBNQ9NP70 447 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 SCN3BQ9NY72 215 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 EMC3Q9P0I2 261 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 KLHL9Q9P2J3 617 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 BLOC1S6Q9UL45 172 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 ZNF175Q9Y473 711 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 ICE1Q9Y2F5 2266 aa12.58□□□□□ -0.4
CD4-208ENST00000538827 PRSS37A4D1T9 235 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 SLC35F4A4IF30 521 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 OR6C68A6NDL8 312 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 SNTNA6NMZ2 147 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 PRODHO43272 600 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 TNFAIP8O95379 198 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 IGHG1P01857 330 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 EEF1B2P24534 225 aaKnown RBP12.57□□□□□ -0.4
CD4-208ENST00000538827 PYCR1P32322 319 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 CENPAP49450 140 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 ZNF91Q05481 1191 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 RUNX1T1Q06455 604 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 ACSF3Q4G176 576 aaPredicted RBP12.57□□□□□ -0.4
CD4-208ENST00000538827 LCN1P1Q5VSP4 162 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 LAIR2Q6ISS4 152 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 AAED1Q7RTV5 226 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.57□□□□□ -0.4
CD4-208ENST00000538827 WDFY1Q8IWB7 410 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 SYT14Q8NB59 555 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 NPEPL1Q8NDH3 523 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 ZNF540Q8NDQ6 660 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 PROKR2Q8NFJ6 384 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 ADAD1Q96M93 576 aaKnown RBP12.57□□□□□ -0.4
CD4-208ENST00000538827 SLX1AQ9BQ83 275 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 RHNO1Q9BSD3 238 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 CALHM2Q9HA72 323 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 FLVCR1Q9Y5Y0 555 aa12.57□□□□□ -0.4
CD4-208ENST00000538827 ARHGAP21Q5T5U3 1957 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 LOC102725191A0A1B0GVB3 256 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 SH3D21A4FU49 640 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 FIGNL2A6NMB9 653 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 FAM171A2A8MVW0 826 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 APOL3O95236 402 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 TGM6O95932 706 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 LYNP07948 512 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 DBTP11182 482 aaKnown RBP12.56□□□□□ -0.4
CD4-208ENST00000538827 SPI1P17947 270 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 CSNK1A1P48729 337 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 FMODQ06828 376 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 LGALS3BPQ08380 585 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 RNPS1Q15287 305 aaKnown RBP12.56□□□□□ -0.4
CD4-208ENST00000538827 ZNF362Q5T0B9 420 aaPredicted RBP12.56□□□□□ -0.4
CD4-208ENST00000538827 C1orf185Q5T7R7 199 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 AADACL4Q5VUY2 407 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 RPTNQ6XPR3 784 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 AHSA2Q719I0 299 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 OR51L1Q8NGJ5 315 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 OR6K6Q8NGW6 343 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 OR6N1Q8NGY5 312 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 OR2T4Q8NH00 348 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 OR6X1Q8NH79 312 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 FAM57AQ8TBR7 257 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 RFKQ969G6 155 aa12.56□□□□□ -0.4
CD4-208ENST00000538827 ZNF566Q969W8 418 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms