RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SPAARA0A1B0GVQ0 90 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 ACOD1A6NK06 481 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 GALR2O43603 387 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-205ENST00000538545 HPGDSO60760 199 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 DLGAP3O95886 979 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 IGF2P01344 180 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 OCM2P0CE71 109 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 OCMP0CE72 109 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-205ENST00000538545 DLSTP36957 453 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 APOBEC1P41238 236 aaKnown RBP12.68□□□□□ -0.38
ACTN1-205ENST00000538545 ACTC1P68032 377 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 ACTA1P68133 377 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 SIRPAP78324 504 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 POU4F2Q12837 409 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 EXT1Q16394 746 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 CDONQ4KMG0 1287 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 SPANXN2Q5MJ10 180 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 LCN1P1Q5VSP4 162 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 LRRN1Q6UXK5 716 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 Q6ZNX1 250 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 SLC43A2Q8N370 569 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 NSMAFQ92636 917 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 NKX3-1Q99801 234 aaPredicted RBP12.68□□□□□ -0.38
ACTN1-205ENST00000538545 TXNIPQ9H3M7 391 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 MRPL22Q9NWU5 206 aaKnown RBP12.68□□□□□ -0.38
ACTN1-205ENST00000538545 PCDHGB6Q9Y5F9 930 aa12.68□□□□□ -0.38
ACTN1-205ENST00000538545 LOC101059948A0A1B0GTJ6 334 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 LOC110117498-PIK3R3F6TDL0 507 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 APEHP13798 732 aaKnown RBP12.67□□□□□ -0.38
ACTN1-205ENST00000538545 CDK5R1Q15078 307 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 ZNF79Q15937 498 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 SLC25A35Q3KQZ1 300 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 IDNKQ5T6J7 187 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 EEF1A1P5Q5VTE0 462 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 LIPNQ5VXI9 398 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 CARD17Q5XLA6 110 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 LYSMD2Q8IV50 215 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 ESX1Q8N693 406 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 DEFB124Q8NES8 71 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 OR2T4Q8NH00 348 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 STK35Q8TDR2 534 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 ZNF775Q96BV0 537 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-205ENST00000538545 SLC30A2Q9BRI3 323 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 KLHL13Q9P2N7 655 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 LIPT2A6NK58 231 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 TRIM3O75382 744 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-205ENST00000538545 TNFSF15O95150 251 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 SPARCP09486 303 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 RPS11P62280 158 aaKnown RBP eCLIP12.67□□□□□ -0.38
ACTN1-205ENST00000538545 BAK1Q16611 211 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 CORO6Q6QEF8 472 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 LINC00346Q8IVM7 164 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 OR10AC1Q8NH08 325 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 SPRY4Q9C004 299 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 SLC25A18Q9H1K4 315 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 INPP5EQ9NRR6 644 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 LAMP5Q9UJQ1 280 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 NOX1Q9Y5S8 564 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 V9GYH0 126 aa12.67□□□□□ -0.38
ACTN1-205ENST00000538545 NCOA6Q14686 2063 aaPredicted RBP12.67□□□□□ -0.38
ACTN1-205ENST00000538545 SLC22A23A1A5C7 686 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 ZNF593O00488 134 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-205ENST00000538545 TP53I11O14683 189 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 OR2T1O43869 369 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 UPK1BO75841 260 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 ZFPL1O95159 310 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 MLF1P58340 268 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 RAB15P59190 212 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 CARTPTQ16568 116 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SLC35D3Q5M8T2 416 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 RAET1LQ5VY80 246 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 H1FNTQ75WM6 255 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-205ENST00000538545 GPALPP1Q8IXQ4 340 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 UBE2J2Q8N2K1 259 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 YIPF7Q8N8F6 280 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 M1APQ8TC57 530 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 DDIT4LQ96D03 193 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 DIRAS2Q96HU8 199 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SLCO1C1Q9NYB5 712 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 B3GAT1Q9P2W7 334 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 CMAHPQ9Y471 501 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 DOCK7Q96N67 2140 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 RFPL3SP0C7P2 107 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SPNP16150 400 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 HTR3AP46098 478 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SOX2P48431 317 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 GBX2P52951 348 aaPredicted RBP12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SLC25A1P53007 311 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 BIDP55957 195 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 OR2B6P58173 313 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 CAMK2DQ13557 499 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 TAB1Q15750 504 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.66□□□□□ -0.384e-6■■□□□ 13.3
ACTN1-205ENST00000538545 TRIM16LQ309B1 348 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 OPN5Q6U736 354 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 SLC16A9Q7RTY1 509 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 PLCZ1Q86YW0 608 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 OR8H2Q8N162 312 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 OR51A4Q8NGJ6 313 aa12.66□□□□□ -0.38
ACTN1-205ENST00000538545 RGP1Q92546 391 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms