RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CAV2P51636 162 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 AKR1D1P51857 326 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CAV3P56539 151 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 SELENBP1Q13228 472 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 IL11RAQ14626 422 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ZNF181Q2M3W8 571 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CD300LGQ6UXG3 332 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 NT5CQ8TCD5 201 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CT55Q8WUE5 264 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 SPNS1Q9H2V7 528 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ZNF286AQ9HBT8 521 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GALNT9Q9HCQ5 603 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 HRASLSQ9HDD0 168 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 DUSP22Q9NRW4 184 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TBCCD1Q9NVR7 557 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TRGV5A0A0B4J1U4 118 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TMEM212A6NML5 194 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 D6RAR5 112 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CYB5BO43169 146 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CREBL2O60519 120 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 GM2AP17900 193 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 PCBP4P57723 403 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 PPP1CAP62136 330 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 RPS23P62266 143 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 FAM53BQ14153 422 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 MPEG1Q2M385 716 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TBRG1Q3YBR2 411 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GDPD3Q7L5L3 318 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CHDHQ8NE62 594 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 TMEM185AQ8NFB2 350 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 OR4D9Q8NGE8 314 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 OR56B2PQ8NGI1 322 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ST7LQ8TDW4 575 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 Q96M85 177 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ZNF583Q96ND8 569 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GNB4Q9HAV0 340 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GPR173Q9NS66 373 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 RGPD3A6NKT7 1758 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 TRBV5-4A0A0C4DH59 114 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ZC3H12DA2A288 527 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 BTBD17A6NE02 478 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 EPOPA6NHQ4 379 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GABRPO00591 440 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 ETHE1O95571 254 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 AKAIN1P0CW23 69 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 APEHP13798 732 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 ZNF81P51508 661 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GRB2P62993 217 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 RIPPLY1Q0D2K3 151 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 GPR176Q14439 515 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 SMN1Q16637 294 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 MEP1BQ16820 701 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 WIPI1Q5MNZ9 446 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 CORO6Q6QEF8 472 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CPEB3Q8NE35 698 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 DEFB108BQ8NET1 73 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 CA5BP1Q8WTZ4 195 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 INTS12Q96CB8 462 aaKnown RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 SARGQ9BW04 601 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 QPCTLQ9NXS2 382 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 RASD1Q9Y272 281 aa4.91□□□□□ -1.62
LRP6-203ENST00000538239 TRIP12Q14669 1992 aaPredicted RBP4.91□□□□□ -1.62
LRP6-203ENST00000538239 FUOMA2VDF0 154 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 CD14P08571 375 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 CLDN12P56749 244 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 PHC1P78364 1004 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 AADACL3Q5VUY0 350 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 RPL22L1Q6P5R6 122 aaKnown RBP4.9□□□□□ -1.62
LRP6-203ENST00000538239 ADGRF3Q8IZF5 1079 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 LIPHQ8WWY8 451 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 NIPSNAP1Q9BPW8 284 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 OCSTAMPQ9BR26 566 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 NUDT9Q9BW91 350 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 EIF5A2Q9GZV4 153 aaKnown RBP4.9□□□□□ -1.62
LRP6-203ENST00000538239 TMEM38AQ9H6F2 299 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 ACKR4Q9NPB9 350 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 SLC22A11Q9NSA0 550 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 GFOD1Q9NXC2 390 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 CLDN24A6NM45 220 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 SNAPC5O75971 98 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 SELEP16581 610 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 DRD3P35462 400 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 GIPRP48546 466 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 HOXA1P49639 335 aaPredicted RBP4.9□□□□□ -1.62
LRP6-203ENST00000538239 HCCSP53701 268 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 ZNF638Q14966 1978 aaKnown RBP4.9□□□□□ -1.62
LRP6-203ENST00000538239 ANKRD34AQ69YU3 496 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 KCTD20Q7Z5Y7 419 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 ANKRD37Q7Z713 158 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 PTRH1Q86Y79 214 aaKnown RBP4.9□□□□□ -1.62
LRP6-203ENST00000538239 FAM185AQ8N0U4 392 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 ZNF454Q8N9F8 522 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 ANKRD53Q8N9V6 530 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 GPR119Q8TDV5 335 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 MUL1Q969V5 352 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 ZNF696Q9H7X3 374 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 GHRLQ9UBU3 117 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 OR52A1Q9UKL2 312 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 SYT5O00445 386 aa4.9□□□□□ -1.62
LRP6-203ENST00000538239 P2RX6O15547 441 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms