RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PLPPR2Q96GM1 343 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 MRGPRX4Q96LA9 322 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 MUS81Q96NY9 551 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 SLC26A1Q9H2B4 701 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 SLC7A10Q9NS82 523 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 SPRR3Q9UBC9 169 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 EIF3KQ9UBQ5 218 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 OR14J1Q9UGF5 321 aa6.47□□□□□ -1.37
MSH6-209ENST00000538136 RBM7Q9Y580 266 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 ANKRD17O75179 2603 aaKnown RBP6.47□□□□□ -1.37
MSH6-209ENST00000538136 IGLV3-12A0A075B6K2 115 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 H3BMH7 237 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 ABCD4O14678 606 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 TSPAN2O60636 221 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 HIST1H1CP16403 213 aaKnown RBP6.46□□□□□ -1.37
MSH6-209ENST00000538136 VHLP40337 213 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 SLC15A1P46059 708 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 RELAQ04206 551 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 EIF2B1Q14232 305 aaKnown RBP6.46□□□□□ -1.37
MSH6-209ENST00000538136 FGFBP1Q14512 234 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 RDH10Q8IZV5 341 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 JAGN1Q8N5M9 183 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 TSPEARQ8WU66 669 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 DCUN1D5Q9BTE7 237 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 TMED9Q9BVK6 235 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 RNPEPL1Q9HAU8 725 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 TAS2R16Q9NYV7 291 aa6.46□□□□□ -1.37
MSH6-209ENST00000538136 TESQ9UGI8 421 aaKnown RBP6.46□□□□□ -1.37
MSH6-209ENST00000538136 AQP12BA6NM10 295 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 CDC42EP2O14613 210 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 WDR1O75083 606 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 CELP19835 753 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 PRKAR1BP31321 381 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 DAG1Q14118 895 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 TSTQ16762 297 aaKnown RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 ZFP1Q6P2D0 407 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 BTN2A1Q7KYR7 527 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 DOLPP1Q86YN1 238 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 AQP12AQ8IXF9 295 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 CCL17Q92583 94 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 ZNF285Q96NJ3 590 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 RBM4BQ9BQ04 359 aaKnown RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 RBM4Q9BWF3 364 aaKnown RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 SRXN1Q9BYN0 137 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 ACTR6Q9GZN1 396 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 CHST11Q9NPF2 352 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 SMPD3Q9NY59 655 aaPredicted RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 ERGIC3Q9Y282 383 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 ITPR1Q14643 2758 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 FAM230AA0A1W2PPH8 454 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 RER1O15258 196 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 EIF1BO60739 113 aaKnown RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 HLA-DPB1P04440 258 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 KRT8P05787 483 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 ITGA5P08648 1049 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 HTR3AP46098 478 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 C21orf58P58505 322 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 SFRP4Q6FHJ7 346 aaPredicted RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 DNM1P34Q6PK57 102 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 ASRGL1Q7L266 308 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 MRPL21Q7Z2W9 205 aaKnown RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 ABHD12BQ7Z5M8 362 aaPredicted RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 BTLAQ7Z6A9 289 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 GOLM1Q8NBJ4 401 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 ZNF671Q8TAW3 534 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 SETD6Q8TBK2 473 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 GNPDA2Q8TDQ7 276 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 MROQ9BYG7 248 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 ZNF703Q9H7S9 590 aaPredicted RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 A4GALTQ9NPC4 353 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 VNN3Q9NY84 501 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 C15orf41Q9Y2V0 281 aa6.46□□□□□ -1.38
MSH6-209ENST00000538136 UBR5O95071 2799 aaPredicted RBP6.46□□□□□ -1.38
MSH6-209ENST00000538136 ZNF593O00488 134 aaPredicted RBP6.45□□□□□ -1.38
MSH6-209ENST00000538136 CHP2O43745 196 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 DXOO77932 396 aaKnown RBP6.45□□□□□ -1.38
MSH6-209ENST00000538136 EDNRAP25101 427 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 LRIF1Q5T3J3 769 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 SLC30A8Q8IWU4 369 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 BBS1Q8NFJ9 593 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 OR2AE1Q8NHA4 323 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 UTP4Q969X6 686 aaKnown RBP6.45□□□□□ -1.38
MSH6-209ENST00000538136 CPNE4Q96A23 557 aaPredicted RBP6.45□□□□□ -1.38
MSH6-209ENST00000538136 CREB3L1Q96BA8 519 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 ORAI1Q96D31 301 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 ZNF837Q96EG3 531 aaPredicted RBP6.45□□□□□ -1.38
MSH6-209ENST00000538136 RNF6Q9Y252 685 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 STAB1Q9NY15 2570 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 MYLKQ15746 1914 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 C16orf97H3BN30 126 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 HCKP08631 526 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 GNAO1P09471 354 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 RAD52P43351 418 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 KIR2DL3P43628 341 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 CRISP1P54107 249 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 PTGES3Q15185 160 aaKnown RBP6.45□□□□□ -1.38
MSH6-209ENST00000538136 PLPPR5Q32ZL2 321 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 C1orf185Q5T7R7 199 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 CCDC80Q76M96 950 aa6.45□□□□□ -1.38
MSH6-209ENST00000538136 GATAD2BQ8WXI9 593 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms